Miyakogusa Predicted Gene
- Lj0g3v0353159.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0353159.1 Non Chatacterized Hit- tr|I1K6K2|I1K6K2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22404
PE,75.65,0,Tryptophan synthase beta subunit-like PLP-dependent
enzymes,Tryptophan synthase beta subunit-like PL,gene.g27704.t1.1
(708 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75499 similar to UniRef100_A7QIU2 Cluster: Chromosome... 244 6e-64
gnl|LJGI|TC77505 similar to UniRef100_A7QIU2 Cluster: Chromosome... 96 4e-19
>gnl|LJGI|TC75499 similar to UniRef100_A7QIU2 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 976
Score = 244 bits (123), Expect = 6e-64
Identities = 442/551 (80%), Gaps = 13/551 (2%)
Strand = Plus / Plus
Query: 139 aggcagctgcacttcaagtgtgaatgctggcaaaaatgcggagcgtttaaattcagagga 198
||||||||| |||| ||||||||||| | |||||| | ||||| |||||||| |||||
Sbjct: 1 aggcagctgtacttaaagtgtgaatgtttccaaaaaggtggagcttttaaatttagaggt 60
Query: 199 gcttacaatgcagttttctctcttcatgacgaagaggctgctaaaggggttattacacac 258
|| | |||||| ||||||||||| | |||||||| ||| | ||||||||||||||||||
Sbjct: 61 gcctgcaatgctgttttctctctcaacgacgaagatgcttccaaaggggttattacacac 120
Query: 259 agcagcggaaatcatgctgcagccctctctttggcagccaagcttcgtgggatccctgcc 318
||||| ||||| ||||||||||| | |||||||||| || || || || ||||||||
Sbjct: 121 agcagtggaaaccatgctgcagcgttggctttggcagcaaaactacgcggtatccctgca 180
Query: 319 ttcatagttgttccaaaaactgcacccacctgcaaagtggataatgtaatgcgctatggt 378
| |||||| ||||||||| ||| || || |||||||| || ||||||| ||| || |||
Sbjct: 181 tatatagttattccaaaaaatgctccaacttgcaaagttgagaatgtaaagcggtacggt 240
Query: 379 ggtcatgttatcttctccgaggacactatcaaatcaagagaggagactgcagctagagtg 438
||||| ||||||| || || | | |||| ||||||| ||||| |||||| | ||||
Sbjct: 241 ggtcaggttatctggtctgatgcctctatgcaatcaagggaggatactgcaaagaaagtg 300
Query: 439 cagcaagaaactggtggtatacttataccgtcatctaatgatgggcgcataatgagtggt 498
|||||||||||||| ||| ||||||| ||| ||||||||| |||||| |||||||
Sbjct: 301 ttgcaagaaactggtgctatccttatacatccatataatgatggacgcatattgagtggc 360
Query: 499 cagggcaccatatcacttgagcttttggaacaagtcccaaacctagatgcactagttgta 558
||||| ||||||||| | ||| || |||||||||||||| | | ||| | ||
Sbjct: 361 cagggtaccatatcattggagtttctggaacaagtcccacatatcgatacgct------- 413
Query: 559 cctataagtggaggtgggatgatctcaggattggcactggctgccaagtccatcaaccct 618
||||| ||||| |||| |||||| | ||| ||||||||||||||||||||||
Sbjct: 414 ------agtggtggtggtttgatatcaggagtagcattggctgccaagtccatcaacccg 467
Query: 619 gctattcgaattttagcggccgaacctaatggggctgatgatgcagcacagtctaaagcg 678
|||||||| ||||| || || |||||||| |||||||||||||||||||| ||||| ||
Sbjct: 468 gctattcggattttggctgctgaacctaaaggggctgatgatgcagcacaatctaaggca 527
Query: 679 gctgggaggat 689
|||||||||||
Sbjct: 528 gctgggaggat 538
>gnl|LJGI|TC77505 similar to UniRef100_A7QIU2 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 562
Score = 95.6 bits (48), Expect = 4e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 640 gaacctaatggggctgatgatgcagcacagtctaaagcggctgggaggatta 691
|||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaacctaaaggggctgatgatgcagcacagtctaaagcggctgggaggatta 52