Miyakogusa Predicted Gene
- Lj0g3v0353039.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0353039.1 Non Chatacterized Hit- tr|C5WXL4|C5WXL4_SORBI
Putative uncharacterized protein Sb01g033250
OS=Sorghu,52.27,0.000001,WW_DOMAIN_2,WW/Rsp5/WWP; no description,NULL;
OS03G0396900 PROTEIN,NULL; S-ADENOSYLMETHIONINE-DEPEND,CUFF.24297.1
(1530 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63132 similar to UniRef100_Q2HU54 Cluster: SAM (And s... 1499 0.0
gnl|LJGI|TC70637 similar to UniRef100_Q2HU54 Cluster: SAM (And s... 1283 0.0
gnl|LJGI|FS359068 similar to UniRef100_A7NTX2 Cluster: Chromosom... 258 9e-68
>gnl|LJGI|TC63132 similar to UniRef100_Q2HU54 Cluster: SAM (And some other
nucleotide) binding motif; WW/Rsp5/WWP; n=1; Medicago
truncatula|Rep: SAM (And some other nucleotide) binding
motif; WW/Rsp5/WWP - Medicago truncatula (Barrel medic),
partial (27%)
Length = 907
Score = 1499 bits (756), Expect = 0.0
Identities = 791/806 (98%), Gaps = 15/806 (1%)
Strand = Plus / Plus
Query: 1 atggtcatcgctgattctgactacgaaggtcctgcaatcgaagccctcggttctctcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atggtcatcgctgattctgactacgaaggtcctgcaatcgaagccctcggttctctcttc 161
Query: 61 aagatcacccaagtctttctctgggatgatggccttcaacttccattatcaactcaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 aagatcacccaagtctttctctgggatgatggccttcaacttccattatcaactcaacaa 221
Query: 121 tccaaattcacccaagaacctcatgacgatgacgccgcagaccctcttcctgattggagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tccaaattcacccaagaacctcatgacgatgacgccgcagaccctcttcctgattggagt 281
Query: 181 gaccttattctacccgaggatttggaacttaacaaggagatgaatgaattggggctccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gaccttattctacccgaggatttggaacttaacaaggagatgaatgaattggggctccct 341
Query: 241 ctttcctttcagacaaccaagcag---------------aaatgtggaacagtaaaaggc 285
|||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 342 ctttcctttcagacaaccaagcagtctatcatgtcacagaaatgtggaacagtaaaaggc 401
Query: 286 aaaagaaagggtgcacgttcaaagcaacaacatccttctcatgatcctgtagctgaaact 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aaaagaaagggtgcacgttcaaagcaacaacatccttctcatgatcctgtagctgaaact 461
Query: 346 ctatatgaagcgaatgtggaggaagttgcatctcttgctgaatttcatgataaaacaaac 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ctatatgaagcgaatgtggaggaagttgcatctcttgctgaatttcatgataaaacaaac 521
Query: 406 agttctatatcttgtatatcaatactaggccaaagtgaatcatcttactgtgatggtgca 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agttctatatcttgtatatcaatactaggccaaagtgaatcatcttactgtgatggtgca 581
Query: 466 gtggaagttgatatgacccattgtgcctctggtgaaggagaattagaatcgcttcccaca 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gtggaagttgatatgacccattgtgcctctggtgaaggagaattagaatcgcttcccaca 641
Query: 526 tgttcagaagggagtggatgtgacagaattgatgggtcaaattattgcagtgaacatgga 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgttcagaagggagtggatgtgacagaattgatgggtcaaattattgcagtgaacatgga 701
Query: 586 gagtggatggtgctctgggatactttctataagagaagatacttttataatgtcacaacg 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gagtggatggtgctctgggatactttctataagagaagatacttttataatgtcacaacg 761
Query: 646 gactcttctacatgggacccacctccagggatggaacatctagcaattggtgggtctact 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gactcttctacatgggacccacctccagggatggaacatctagcaattggtgggtctact 821
Query: 706 gaatcagatgataatgaagctctaaaatcagcagaggaccatggaacacaaaataacaat 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gaatcagatgataatgaagctctaaaatcagcagaggaccatggaacacaaaataacaat 881
Query: 766 gaaccacctgacgaaacctggattga 791
||||||||||||||||||||||||||
Sbjct: 882 gaaccacctgacgaaacctggattga 907
>gnl|LJGI|TC70637 similar to UniRef100_Q2HU54 Cluster: SAM (And some other
nucleotide) binding motif; WW/Rsp5/WWP; n=1; Medicago
truncatula|Rep: SAM (And some other nucleotide) binding
motif; WW/Rsp5/WWP - Medicago truncatula (Barrel medic),
partial (23%)
Length = 695
Score = 1283 bits (647), Expect = 0.0
Identities = 656/659 (99%)
Strand = Plus / Plus
Query: 1 atggtcatcgctgattctgactacgaaggtcctgcaatcgaagccctcggttctctcttc 60
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 37 atggtcatcgctgattctgactacgaacctcctgcaatcgaagccctcggttctctcttc 96
Query: 61 aagatcacccaagtctttctctgggatgatggccttcaacttccattatcaactcaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 aagatcacccaagtctttctctgggatgatggccttcaacttccattatcaactcaacaa 156
Query: 121 tccaaattcacccaagaacctcatgacgatgacgccgcagaccctcttcctgattggagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 tccaaattcacccaagaacctcatgacgatgacgccgcagaccctcttcctgattggagt 216
Query: 181 gaccttattctacccgaggatttggaacttaacaaggagatgaatgaattggggctccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaccttattctacccgaggatttggaacttaacaaggagatgaatgaattggggctccct 276
Query: 241 ctttcctttcagacaaccaagcagaaatgtggaacagtaaaaggcaaaagaaagggtgca 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctttcctttcagacaaccgagcagaaatgtggaacagtaaaaggcaaaagaaagggtgca 336
Query: 301 cgttcaaagcaacaacatccttctcatgatcctgtagctgaaactctatatgaagcgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 cgttcaaagcaacaacatccttctcatgatcctgtagctgaaactctatatgaagcgaat 396
Query: 361 gtggaggaagttgcatctcttgctgaatttcatgataaaacaaacagttctatatcttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gtggaggaagttgcatctcttgctgaatttcatgataaaacaaacagttctatatcttgt 456
Query: 421 atatcaatactaggccaaagtgaatcatcttactgtgatggtgcagtggaagttgatatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atatcaatactaggccaaagtgaatcatcttactgtgatggtgcagtggaagttgatatg 516
Query: 481 acccattgtgcctctggtgaaggagaattagaatcgcttcccacatgttcagaagggagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 acccattgtgcctctggtgaaggagaattagaatcgcttcccacatgttcagaagggagt 576
Query: 541 ggatgtgacagaattgatgggtcaaattattgcagtgaacatggagagtggatggtgctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ggatgtgacagaattgatgggtcaaattattgcagtgaacatggagagtggatggtgctc 636
Query: 601 tgggatactttctataagagaagatacttttataatgtcacaacggactcttctacatg 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 tgggatactttctataagagaagatacttttataatgtcacaacggactcttctacatg 695
>gnl|LJGI|FS359068 similar to UniRef100_A7NTX2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 654
Score = 258 bits (130), Expect = 9e-68
Identities = 130/130 (100%)
Strand = Plus / Minus
Query: 1399 catgtaattgcaattgatattgatccattgaagattgattatgcgagacataatgcttct 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 catgtaattgcaattgatattgatccattgaagattgattatgcgagacataatgcttct 595
Query: 1459 atttatggggtggatgatcaaattgaattcataattggtgattttttcctcttggcgcca 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 atttatggggtggatgatcaaattgaattcataattggtgattttttcctcttggcgcca 535
Query: 1519 aagttaaagg 1528
||||||||||
Sbjct: 534 aagttaaagg 525