Miyakogusa Predicted Gene
- Lj0g3v0353029.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0353029.2 tr|B9MYD9|B9MYD9_POPTR Cc-nbs-lrr resistance
protein OS=Populus trichocarpa GN=POPTRDRAFT_782352
PE=,29.72,0.000000000002,L domain-like,NULL; LRR_7,NULL; no
description,NULL; seg,NULL,CUFF.24298.2
(1225 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW595042 weakly similar to UniRef100_A2Q529 Cluster: Le... 174 8e-43
gnl|LJGI|TC80664 weakly similar to UniRef100_Q2YE88 Cluster: NBS... 92 1e-17
gnl|LJGI|GO023366 similar to UniRef100_Q0DXQ8 Cluster: Os02g0739... 54 2e-06
>gnl|LJGI|BW595042 weakly similar to UniRef100_A2Q529 Cluster: Leucine-rich repeat;
n=1; Medicago truncatula|Rep: Leucine-rich repeat -
Medicago truncatula (Barrel medic), partial (19%)
Length = 486
Score = 174 bits (88), Expect = 8e-43
Identities = 331/409 (80%), Gaps = 11/409 (2%)
Strand = Plus / Plus
Query: 363 catgtcatttccaggtggttgtttacccgcatcactgaagactttgtatatagaggattt 422
|||||||||||| |||| ||||||||| || || || |||||| | | || |||||||
Sbjct: 57 catgtcatttccgggtgattgtttacctgcctctctaaagactcttgaaattaaggattt 116
Query: 423 tagaaaactagaattccctcagcagcagaaacagacacacgagttactagagtggctgga 482
||||||||||||||||||||||||||| |||||||||||||| |||||| |||||
Sbjct: 117 tagaaaactagaattccctcagcagca---acagacacacgagtcactagaaacactgga 173
Query: 483 aataaagagcagctgtgattcgcttacgtctctcccactggaggcttttccaaatctcaa 542
|||| | ||||||| ||||| |||||||| ||||||| ||||||||||||||||
Sbjct: 174 aatacactgcagctgctgctcgctcacgtctctggcactggatacttttccaaatctcaa 233
Query: 543 acgactatccatctcaggttgtgaaagtttagtatctctttcggtgtcagagtcacgggt 602
| ||||||||||| || ||||||| ||| | |||||||| ||||||| | ||| | |
Sbjct: 234 agaactatccatcttagactgtgaaaatttggaatctcttttggtgtcacaatcaggaga 293
Query: 603 tt------ttgcacttcaaaatctga-tcctacttgaggttcgggaatgccccaatttag 655
| | || ||||||||||||| | || |||||| | || ||||| |||||||
Sbjct: 294 tggagatgtcgctcttcaaaatctgacttct-cttgagatcaaagattgcccgaatttag 352
Query: 656 tatcattagcaagagaaggattggctgcgcccaacttgattcgcatcgttgtttctgatt 715
||||||| ||||||||||||||||| || |||||||||||| || ||||||||||
Sbjct: 353 tatcattggcaagagaaggattggcggctcccaacttgattgaattctccgtttctgatt 412
Query: 716 gcgacaagttagagtcattgcctcctcagttgaatactcttctcccaaa 764
|||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 413 gcgacaagttagagtcattgcctcgtcggatgaatactcttctcccaaa 461
>gnl|LJGI|TC80664 weakly similar to UniRef100_Q2YE88 Cluster: NBS-LRR type disease
resistance protein Rps1-k-1; n=1; Glycine max|Rep:
NBS-LRR type disease resistance protein Rps1-k-1 -
Glycine max (Soybean), partial (21%)
Length = 1338
Score = 91.7 bits (46), Expect = 1e-17
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 1001 aatttacaagtctcgagacgttcgattgcaagcagcttctccacctcacctccctccaac 1060
|||| |||||| | |||||||| || |||||| ||||||||||||||| ||||||||||
Sbjct: 1125 aattaacaagtgtggagacgttggagtgcaaggggcttctccacctcacgtccctccaac 1184
Query: 1061 gattagcaattgatgattgtccaaagctgaacaacatggcgggagaaaggttgcctgcct 1120
|||| ||||| || ||||| | |||||| || ||||||||||||||| || ||||||
Sbjct: 1185 aattatcaatttgggactgtcccaggctgaagaatatggcgggagaaaggctgtctgcct 1244
Query: 1121 ctctaa 1126
||||||
Sbjct: 1245 ctctaa 1250
Score = 67.9 bits (34), Expect = 1e-10
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 643 tgccccaatttagtatcattagcaagagaaggattggctgcgcccaacttgattcgcatc 702
|||||||| || |||||||| ||| |||||||||| |||||||||||||| | |||
Sbjct: 758 tgccccaaatttgtatcattcccaatagaaggattgcatgcgcccaacttgactgaaatc 817
Query: 703 gttgtttctgattgcgacaagttagagtcattgcctcctcagttgaatactcttctccca 762
| || ||| |||||||| ||||| ||||||| ||| ||| |||||||||||||||||
Sbjct: 818 gacgtctcttattgcgacgagttaaagtcattaccttgtcacatgaatactcttctccca 877
Query: 763 aa 764
||
Sbjct: 878 aa 879
>gnl|LJGI|GO023366 similar to UniRef100_Q0DXQ8 Cluster: Os02g0739100 protein; n=2; Oryza
sativa Japonica Group|Rep: Os02g0739100 protein - Oryza
sativa subsp. japonica (Rice), partial (6%)
Length = 678
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1025 attgcaagcagcttctccacctcacctccctccaa 1059
|||||||| |||||||||||||||||||| |||||
Sbjct: 254 attgcaaggagcttctccacctcacctccttccaa 288