Miyakogusa Predicted Gene
- Lj0g3v0352139.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0352139.1 tr|J8X6I2|J8X6I2_NEIME IgA-specific serine
endopeptidase OS=Neisseria meningitidis NM576 GN=iga
PE=4,32.39,5.1,seg,NULL,CUFF.24217.1
(274 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AU251720 UniRef100_Q8JL57 Cluster: ORF10; n=1; Choristo... 367 e-101
gnl|LJGI|TC58604 similar to UniRef100_P09694 Cluster: Uncharacte... 311 1e-84
gnl|LJGI|TC59801 167 4e-41
>gnl|LJGI|AU251720 UniRef100_Q8JL57 Cluster: ORF10; n=1; Choristoneura fumiferana
granulovirus|Rep: ORF10 - Choristoneura fumiferana,
partial (3%)
Length = 374
Score = 367 bits (185), Expect = e-101
Identities = 203/209 (97%)
Strand = Plus / Plus
Query: 1 atggatgaagctgtgcctgagaaaattcttgaatcttcctcttcatcaatttctgtcgtg 60
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 14 atggatgaagccgtgcctgagaaaattcttgaagcttcctcttcatcaatttctgtcgtg 73
Query: 61 gaagaagccattgcttctgattcagtgtcaaccactgatcttggtgtagcatcttccctt 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 74 gaagaagccattgcttctgattcagtgtcgaccactgatcttggtgtagcatcttccctt 133
Query: 121 acttcgcatctttcgttctttgccgatcaagatgttcaattgctggcgtggaaaccagcc 180
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 134 acttcgcatctttcgttctttgccgatcaagatgttcaatttccggcgtggaaaccagcc 193
Query: 181 accaatgcatatgtttttggaaatttcag 209
|||||||| ||||||||||||||||||||
Sbjct: 194 accaatgcttatgtttttggaaatttcag 222
>gnl|LJGI|TC58604 similar to UniRef100_P09694 Cluster: Uncharacterized protein IRL4;
n=1; Human herpesvirus 5 strain AD169|Rep:
Uncharacterized protein IRL4 - Human cytomegalovirus
(strain AD169) (HHV-5) (Human herpesvirus 5), partial
(12%)
Length = 1221
Score = 311 bits (157), Expect = 1e-84
Identities = 223/245 (91%)
Strand = Plus / Plus
Query: 1 atggatgaagctgtgcctgagaaaattcttgaatcttcctcttcatcaatttctgtcgtg 60
|||| |||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 977 atggttgaaactgtgcctgagaaaattcttgaagcttccgcttcatcaatttctctcgtg 1036
Query: 61 gaagaagccattgcttctgattcagtgtcaaccactgatcttggtgtagcatcttccctt 120
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 1037 gaagaagccattgcttctgattcagtgtcgaccattgatcttggtgtagcatcttccctt 1096
Query: 121 acttcgcatctttcgttctttgccgatcaagatgttcaattgctggcgtggaaaccagcc 180
| ||||| ||||||||||| ||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 1097 atttcgcgtctttcgttctgtgctgatcagaatgttcaatttctggcatggaaaccagcc 1156
Query: 181 accaatgcatatgtttttggaaatttcagtgagggtgtgatcaatgttggagctgattca 240
|||||||| |||| |||||||||||| ||||||| |||||| ||| ||||||| ||||||
Sbjct: 1157 accaatgcttatgcttttggaaattttagtgaggctgtgattaatcttggagcagattca 1216
Query: 241 tcttc 245
|||||
Sbjct: 1217 tcttc 1221
>gnl|LJGI|TC59801
Length = 1003
Score = 167 bits (84), Expect = 4e-41
Identities = 117/128 (91%)
Strand = Plus / Plus
Query: 106 gtagcatcttcccttacttcgcatctttcgttctttgccgatcaagatgttcaattgctg 165
|||||||| ||| || |||||||||||||||||||||||||| ||||||||||| | |
Sbjct: 394 gtagcatcctcctttgtttcgcatctttcgttctttgccgatcgggatgttcaattaccg 453
Query: 166 gcgtggaaaccagccaccaatgcatatgtttttggaaatttcagtgagggtgtgatcaat 225
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 454 gcgtggaaaccagccaccaatgcttatgtttttggagatttcagtgagggtgtgatcaat 513
Query: 226 gttggagc 233
|||||||
Sbjct: 514 cttggagc 521
Score = 60.0 bits (30), Expect = 7e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 23 aaattcttgaatcttcctcttcatcaatttctgtcgtggaagaagc 68
||||||||||| |||| ||||||||||||||||| ||||||||||
Sbjct: 254 aaattcttgaagcttcgccttcatcaatttctgtcatggaagaagc 299