Miyakogusa Predicted Gene

Lj0g3v0350949.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0350949.1 tr|A9TVB0|A9TVB0_PHYPA Predicted protein
(Fragment) OS=Physcomitrella patens subsp. patens
GN=PHYPAD,38.59,1e-18,URIDINKINASE,Uridine kinase; no
description,NULL; seg,NULL; P-loop containing nucleoside
triphosphat,CUFF.24116.1
         (633 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79162 similar to UniRef100_A7PGI4 Cluster: Chromosome...   151   6e-36
gnl|LJGI|TC69462 similar to UniRef100_A7PGI4 Cluster: Chromosome...    52   4e-06

>gnl|LJGI|TC79162 similar to UniRef100_A7PGI4 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 365

 Score =  151 bits (76), Expect = 6e-36
 Identities = 103/112 (91%)
 Strand = Plus / Plus

                                                                       
Query: 521 tggaccttcgagtatctgtaacaggcggcgttcaccttgaccttgttaaacgagttatac 580
           ||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||||
Sbjct: 2   tggaccttcgagtttctgttacaggtggagttcaccttgaccttgtaaaacgagttatac 61

                                                               
Query: 581 gtgatatacaacgtgctggtcaagaacctgaagaaattattcatcaaatatc 632
           |||| |||||||||||| | ||||||||| ||||||||||||||||||||||
Sbjct: 62  gtgacatacaacgtgctagccaagaacctcaagaaattattcatcaaatatc 113


>gnl|LJGI|TC69462 similar to UniRef100_A7PGI4 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 593

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 98/122 (80%)
 Strand = Plus / Plus

                                                                       
Query: 169 caaaagaatgatggaataatattggtaggggtggcaggtccttcaggggctgggaagact 228
           ||||||||||||||||| ||||| ||||| || ||||| || || || || ||||| |||
Sbjct: 283 caaaagaatgatggaattatattagtaggagttgcaggcccctctggagcagggaaaact 342

                                                                       
Query: 229 gcatttactgaaaagatactcaacatcttgccaggcattgcagtcatttcaatggacaat 288
           |  || ||||| ||||| |||||  |  ||||| |||| || |||||  |||||||||||
Sbjct: 343 gttttcactgagaagattctcaattttatgccaagcatagctgtcataacaatggacaat 402

             
Query: 289 ta 290
           ||
Sbjct: 403 ta 404