Miyakogusa Predicted Gene

Lj0g3v0350839.4
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0350839.4 tr|I8KVH7|I8KVH7_YERPE Rhs element Vgr family
protein (Fragment) OS=Yersinia pestis PY-72 PE=4 SV=1,45.71,0.86,
,CUFF.24118.4
         (240 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81856                                                      464   e-130

>gnl|LJGI|TC81856 
          Length = 546

 Score =  464 bits (234), Expect = e-130
 Identities = 237/238 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   gtgtttttgttctctcgcccaacgtacccatcgcgccgttcgccgcgcctctcaggactc 62
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gtgtttttgttctctcccccaacgtacccatcgcgccgttcgccgcgcctctcaggactc 219

                                                                       
Query: 63  atcgctgtgccgcgcctccgaggctccgccgcgccatgccagacttccaggacccatcgc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 atcgctgtgccgcgcctccgaggctccgccgcgccatgccagacttccaggacccatcgc 279

                                                                       
Query: 123 tgtgcctcgtctttccgcgcctcctaacacccaccggccaccgccttgtgtcgcgcctcc 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgtgcctcgtctttccgcgcctcctaacacccaccggccaccgccttgtgtcgcgcctcc 339

                                                                     
Query: 183 tgacacccaccgccttgttgcgccactctcctcttttcactcaggcatcatttggtga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgacacccaccgccttgttgcgccactctcctcttttcactcaggcatcatttggtga 397