Miyakogusa Predicted Gene

Lj0g3v0350809.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0350809.1 Non Chatacterized Hit- tr|B8B2Y7|B8B2Y7_ORYSI
Putative uncharacterized protein OS=Oryza sativa subsp,55.26,2e-18,no
description,NULL; SUBFAMILY NOT NAMED,NULL;
HEXAPRENYLDIHYDROXYBENZOATE METHYLTRANSFERASE,Ubiquin,CUFF.24102.1
         (246 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59635 similar to UniRef100_O49354 Cluster: Hexaprenyl...   480   e-135

>gnl|LJGI|TC59635 similar to UniRef100_O49354 Cluster: Hexaprenyldihydroxybenzoate
           methyltransferase, mitochondrial precursor; n=1;
           Arabidopsis thaliana|Rep: Hexaprenyldihydroxybenzoate
           methyltransferase, mitochondrial precursor - Arabidopsis
           thaliana (Mouse-ear cress), partial (75%)
          Length = 1670

 Score =  480 bits (242), Expect = e-135
 Identities = 245/246 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagagcctatgcaactgccattgttgccgcagaatacatcctccgctggcttcctaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 atgagagcctatgcaactgccattgttgccgcagaatacatcctccgctggcttcctaga 773

                                                                       
Query: 61  ggcacacatgagtggtccagttttctcactccagaggaactagtcctgatcttacaacgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 ggcacacatgagtggtccagttttctcactccagaggaactagtcctgatcttacaacgt 833

                                                                       
Query: 121 gccggtatcaacgtggaagagatggcaggatttgtgtataaccccttgacagggcgatgg 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 gccggtatcaacgtggaagggatggcaggatttgtgtataaccccttgacagggcgatgg 893

                                                                       
Query: 181 tctttatcagatgatatcagcgtcaatttcattgcttttggtaccaaaaccaaaagtatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 tctttatcagatgatatcagcgtcaatttcattgcttttggtaccaaaaccaaaagtatt 953

                 
Query: 241 gaatag 246
           ||||||
Sbjct: 954 gaatag 959