Miyakogusa Predicted Gene
- Lj0g3v0350309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0350309.1 tr|G7L767|G7L767_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g0,76.37,0,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
rep,CUFF.24063.1
(1477 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82086 weakly similar to UniRef100_A7QKN3 Cluster: Chr... 1249 0.0
gnl|LJGI|FS318904 weakly similar to UniRef100_A7QKN3 Cluster: Ch... 620 e-177
gnl|LJGI|DC599608 weakly similar to UniRef100_Q4H493 Cluster: AT... 117 2e-25
>gnl|LJGI|TC82086 weakly similar to UniRef100_A7QKN3 Cluster: Chromosome chr2
scaffold_113, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_113, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (44%)
Length = 980
Score = 1249 bits (630), Expect = 0.0
Identities = 633/634 (99%)
Strand = Plus / Plus
Query: 844 ttgaaattctttacctatgctcttgatgtttttgtcaaggaaaatgacgccgctcatgca 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaattctttacctatgctcttgatgtttttgtcaaggaaaatgacgccgctcatgca 60
Query: 904 atccccttgtgggatgccatggtggccggtgggataatgcctaacctgatcatgtacaat 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atccccttgtgggatgccatggtggccggtgggataatgcctaacctgatcatgtacaat 120
Query: 964 gcgatgattgggctgcaatgcaacaatggcgaggtggacaatgcgtttcgcctgctggat 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcgatgattgggctgcaatgcaacaatggcgaggtggacaatgcgtttcgcctgctggat 180
Query: 1024 gagatggtcttgcacggggctttcccggactccttaacctataacatgattttcaaatgc 1083
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 gagatggtcttgcacggggctttcccggactccttaacctataacatgattttcgaatgc 240
Query: 1084 ttggtgaggaacaagaaggttcgcgagacggagagcttctttgctgagatggtcaagaac 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggtgaggaacaagaaggttcgcgagacggagagcttctttgctgagatggtcaagaac 300
Query: 1144 gagtggccgccgacaagttctaactgtgctgcggctatcgcaatgttgtttgattgcgat 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagtggccgccgacaagttctaactgtgctgcggctatcgcaatgttgtttgattgcgat 360
Query: 1204 gaccccgaagcagcacatgagatttggagttacatggttgaaaatcatgtcaagccactt 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaccccgaagcagcacatgagatttggagttacatggttgaaaatcatgtcaagccactt 420
Query: 1264 catgaaagtgccaatgcattgcttattggtatttgtagcttgagtagattttcagaggtc 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 catgaaagtgccaatgcattgcttattggtatttgtagcttgagtagattttcagaggtc 480
Query: 1324 agaaggcatgctgaggacatgctcgatcggaggatcattatatatgaatctacaatgaac 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaaggcatgctgaggacatgctcgatcggaggatcattatatatgaatctacaatgaac 540
Query: 1384 aagttgaaggatgcgttctacacagagggtagaagtagaaaagacagatttgatagcctc 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagttgaaggatgcgttctacacagagggtagaagtagaaaagacagatttgatagcctc 600
Query: 1444 ttccggaggtggaaagctcgtgtcaagttgtaat 1477
||||||||||||||||||||||||||||||||||
Sbjct: 601 ttccggaggtggaaagctcgtgtcaagttgtaat 634
>gnl|LJGI|FS318904 weakly similar to UniRef100_A7QKN3 Cluster: Chromosome chr2
scaffold_113, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_113, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 764
Score = 620 bits (313), Expect = e-177
Identities = 316/317 (99%)
Strand = Plus / Plus
Query: 124 gtctcccccgtcgcgcgaaccctctgcaacctcctcacccgaacctcccctccggaaatc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 448 gtctcccccgtcgcgcgaaccctctgcaacctcctcacccgaacctcccctccagaaatc 507
Query: 184 gaaaccgctctcacctcctccggcatccacccctccgatgactgcgtccgcgaggtcctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaaaccgctctcacctcctccggcatccacccctccgatgactgcgtccgcgaggtcctc 567
Query: 244 aagctctcctacaactacccccactccgccgtcaaattcttccgctgggccggccgcctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 aagctctcctacaactacccccactccgccgtcaaattcttccgctgggccggccgcctc 627
Query: 304 cagaagcattctccccacgcatggaacctcatggtcgatctccttggcaagaacgagctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cagaagcattctccccacgcatggaacctcatggtcgatctccttggcaagaacgagctt 687
Query: 364 ttcgacccaatgtgggacgcgattcgctctatgaaacaagaaggagtgctcacattgcgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ttcgacccaatgtgggacgcgattcgctctatgaaacaagaaggagtgctcacattgcgc 747
Query: 424 actttcgtctcggcttt 440
|||||||||||||||||
Sbjct: 748 actttcgtctcggcttt 764
>gnl|LJGI|DC599608 weakly similar to UniRef100_Q4H493 Cluster: ATP-binding cassette
(ABC) transporter 17; n=1; Rattus norvegicus|Rep:
ATP-binding, partial (1%)
Length = 358
Score = 117 bits (59), Expect = 2e-25
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 124 gtctcccccgtcgcgcgaaccctctgcaacctcctcacccgaacctcccctccggaaat 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtctcccccgtcgcgcgaaccctctgcaacctcctcacccgaacctcccctccggaaat 358