Miyakogusa Predicted Gene

Lj0g3v0349929.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0349929.1 Non Chatacterized Hit- tr|B7ZX39|B7ZX39_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,37.5,0.32,seg,NULL,CUFF.24029.1
         (451 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS351631 similar to UniRef100_A7PIQ5 Cluster: Chromosom...   301   2e-81
gnl|LJGI|TC73875 similar to UniRef100_A1DR83 Cluster: AT-hook DN...   210   5e-54

>gnl|LJGI|FS351631 similar to UniRef100_A7PIQ5 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 695

 Score =  301 bits (152), Expect = 2e-81
 Identities = 152/152 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaggcatctgaccatttggcatcagattaggattcaaattgtacactgcaacctgttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgaggcatctgaccatttggcatcagattaggattcaaattgtacactgcaacctgttg 560

                                                                       
Query: 61  ctgctccaaaccctgagaagaagaaggttctgcactagttgcaattacaccttcattcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgctccaaaccctgagaagaagaaggttctgcactagttgcaattacaccttcattcac 620

                                           
Query: 121 ctcttgttgttcctgcacttgcatctcctctt 152
           ||||||||||||||||||||||||||||||||
Sbjct: 621 ctcttgttgttcctgcacttgcatctcctctt 652



 Score = 77.8 bits (39), Expect = 5e-14
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                  
Query: 413 ccctggttcatcttccaatggaagcctctcataagtagc 451
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ccctggttcatcttccaatggaagcctctcataagtagc 692


>gnl|LJGI|TC73875 similar to UniRef100_A1DR83 Cluster: AT-hook DNA-binding protein;
           n=1; Catharanthus roseus|Rep: AT-hook DNA-binding
           protein - Catharanthus roseus (Rosy periwinkle)
           (Madagascar periwinkle), partial (27%)
          Length = 520

 Score =  210 bits (106), Expect = 5e-54
 Identities = 106/106 (100%)
 Strand = Plus / Minus

                                                                       
Query: 308 cctgcaggctgacaaccccactaggcgccgccggctgccggagcgtcacgttagtcacca 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 cctgcaggctgacaaccccactaggcgccgccggctgccggagcgtcacgttagtcacca 461

                                                         
Query: 368 cgccgctaccactcagcaccgaaaccccacggtggcggcggttggc 413
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cgccgctaccactcagcaccgaaaccccacggtggcggcggttggc 415