Miyakogusa Predicted Gene
- Lj0g3v0349789.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0349789.2 CUFF.24046.2
(771 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome... 396 e-110
gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosom... 293 8e-79
gnl|LJGI|BP059180 similar to UniRef100_A7PH11 Cluster: Chromosom... 149 3e-35
>gnl|LJGI|TC69358 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 795
Score = 396 bits (200), Expect = e-110
Identities = 395/460 (85%)
Strand = Plus / Plus
Query: 62 caacagaaagaagagaagttcttgaagaagttaagaagcagttatggctagcaggacctt 121
|||||||||||| ||| ||||||||||||| ||||||||| ||||||| | || ||||
Sbjct: 330 caacagaaagaactgaaattcttgaagaagtgaagaagcagctatggctttctggtcctt 389
Query: 122 taatatgtgtgagtctcctaaattatagcctaaatatcatatccgtcatgtttgttggac 181
| |||| || | ||| || |||| |||| || | || || |||||||||||||| |
Sbjct: 390 tgatatcagtcactctgctgaatttctgcctcaaccttatctctgtcatgtttgttggtc 449
Query: 182 atctcggtgagttggctctctctggtgcttccatggccacttcttttgcatctgtcacag 241
|||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 450 atcttggcgagttggctctctctggtgcttccatggctacttcttttgcatctgtcacgg 509
Query: 242 gtttcagtttcttggtaggaatggcaagcgccttggacaccttatgtggccagtcatatg 301
|||||||||| ||||||||||||||||| ||||| || ||||||||||| || |||||||
Sbjct: 510 gtttcagtttattggtaggaatggcaagtgccttagataccttatgtggtcaatcatatg 569
Query: 302 gagcaaagcagtatcaaattttaggcatacacatgcagagggccatgttcattcttatga 361
| ||||||||||| | | |||||||| |||||||||||||| ||||| |||||||||
Sbjct: 570 gggcaaagcagtaccgcttgttaggcattcacatgcagagggctatgttgattcttatgg 629
Query: 362 ttgtaagcattccacttgcagttatttgggcaaacacaagatccattcttgttttccttg 421
|||| |||||||| ||||| ||||||||||||||||| ||||||| || |||||||||
Sbjct: 630 ttgtcagcattccgcttgcgattatttgggcaaacacaggatccatcctcattttccttg 689
Query: 422 gccaagatcctgaaatatctacagcagctggggagtatgccaagttaatggtaccaagtc 481
||||||||||||| |||||| ||||||||||||| ||||| ||| ||||||| ||| | |
Sbjct: 690 gccaagatcctgagatatctgcagcagctggggaatatgctaagataatggttccatgcc 749
Query: 482 tttttggttatggtcttctgcagtgcctcaacaggttctt 521
|||||||||||||||||||||| |||||||| || |||||
Sbjct: 750 tttttggttatggtcttctgcaatgcctcaatagattctt 789
>gnl|LJGI|GO013204 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 528
Score = 293 bits (148), Expect = 8e-79
Identities = 349/416 (83%)
Strand = Plus / Plus
Query: 157 atcatatccgtcatgtttgttggacatctcggtgagttggctctctctggtgcttccatg 216
|||||||| || |||||||| || ||||| |||||| || |||| |||||||||| |||
Sbjct: 63 atcatatctgttatgtttgtgggccatctaggtgagctgcctctggctggtgcttcaatg 122
Query: 217 gccacttcttttgcatctgtcacaggtttcagtttcttggtaggaatggcaagcgccttg 276
|||||||||||||| |||||||| ||| | || || ||| | |||||||| || ||||||
Sbjct: 123 gccacttcttttgcttctgtcactggtattagcttgttgctgggaatggccagtgccttg 182
Query: 277 gacaccttatgtggccagtcatatggagcaaagcagtatcaaattttaggcatacacatg 336
|| ||||| ||||| ||||||||||||||||||||| | ||| |||||||||||||||
Sbjct: 183 gataccttttgtgggcagtcatatggagcaaagcagcacagaatgttaggcatacacatg 242
Query: 337 cagagggccatgttcattcttatgattgtaagcattccacttgcagttatttgggcaaac 396
|| ||||||||| ||| |||| ||||||| ||||| || | ||| | ||||||||||||
Sbjct: 243 caaagggccatgctcactcttgtgattgtcagcatacccttagcaatcatttgggcaaac 302
Query: 397 acaagatccattcttgttttccttggccaagatcctgaaatatctacagcagctggggag 456
||||| |||||||| |||||| ||||||||||||||||||||||| ||| ||| ||| |
Sbjct: 303 acaaggtccattctggttttctttggccaagatcctgaaatatctgcagaagcagggaaa 362
Query: 457 tatgccaagttaatggtaccaagtctttttggttatggtcttctgcagtgcctcaacagg 516
||||| |||||||||| ||||| ||||||| ||||||||||| || || || |||||
Sbjct: 363 tatgctcagttaatggttccaagcctttttgcctatggtcttcttcaatgtctaaacaga 422
Query: 517 ttcttgcaaacccaaaatattgtatttccaatgatgctcatctcaggagtgactac 572
||||| ||||| |||||||||||||| |||| ||| ||| ||| ||||| |||||
Sbjct: 423 ttcttacaaacacaaaatattgtattgccaactatgttcagctctggagttactac 478
>gnl|LJGI|BP059180 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 133
Score = 149 bits (75), Expect = 3e-35
Identities = 111/123 (90%)
Strand = Plus / Plus
Query: 62 caacagaaagaagagaagttcttgaagaagttaagaagcagttatggctagcaggacctt 121
|||||||||||| |||||||||||||||||| | ||||||||||||||| ||||||||||
Sbjct: 11 caacagaaagaacagaagttcttgaagaagtgaggaagcagttatggctggcaggacctt 70
Query: 122 taatatgtgtgagtctcctaaattatagcctaaatatcatatccgtcatgtttgttggac 181
|||| ||||||| |||||||||| | || ||||||| ||||| ||||||||||||||||
Sbjct: 71 taatttgtgtgaacctcctaaatttttgcataaatattatatctgtcatgtttgttggac 130
Query: 182 atc 184
|||
Sbjct: 131 atc 133