Miyakogusa Predicted Gene
- Lj0g3v0349789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0349789.1 Non Chatacterized Hit- tr|A5ANA5|A5ANA5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52,0.00008,MatE,Multi antimicrobial extrusion protein; matE: MATE
efflux family protein,Multi antimicrobial ext,CUFF.24046.1
(879 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68231 similar to UniRef100_A7PH11 Cluster: Chromosome... 357 8e-98
gnl|LJGI|GO036543 similar to UniRef100_A7PH11 Cluster: Chromosom... 355 3e-97
gnl|LJGI|BP069580 similar to UniRef100_A7PH11 Cluster: Chromosom... 293 9e-79
>gnl|LJGI|TC68231 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 895
Score = 357 bits (180), Expect = 8e-98
Identities = 291/328 (88%)
Strand = Plus / Plus
Query: 541 tatagtaatgaagttgaagtggtaaaatatgtagcaactataatgccaattcttgcaact 600
||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| |
Sbjct: 4 tatagtaatgaagaagaagtggtcaaatatgtagcaactatgttgccaattcttgcagca 63
Query: 601 tctcactttttggatgcactccagagcgttctttcaggaactgctagaggatgtggttgg 660
|| ||||| |||||| | |||| ||||||||||| | |||||||||||| ||||||
Sbjct: 64 tccaactttctggatggaatccaatctgttctttcaggcaatgctagaggatgcggttgg 123
Query: 661 cagaaaatcggtgcatttgtcaatctggggtcatactatttagttggaattccatcagct 720
|||||||| ||||||||||| ||||||||||| |||||| |||||||||||||| |||||
Sbjct: 124 cagaaaattggtgcatttgtgaatctggggtcgtactatatagttggaattccagcagct 183
Query: 721 attgtgttagcttttgtattgcatcttggcggcaaggggttgtggctggggatcgtatgt 780
|| |||||||||||||||||| || |||| || |||||| |||||||||| ||| |||||
Sbjct: 184 atcgtgttagcttttgtattggatattggagggaaggggctgtggctgggaatcatatgt 243
Query: 781 gcactcattgttcaactattttctctaatgatcattactatacgtactgattgggagcaa 840
||||||||||||||| ||||||| |||||||| ||||||||||| |||||||||||| ||
Sbjct: 244 gcactcattgttcaagtattttccctaatgattattactatacgaactgattgggagaaa 303
Query: 841 gaggcaaagaaggccacagatagagtct 868
||||||||||||||||||||||||||||
Sbjct: 304 gaggcaaagaaggccacagatagagtct 331
>gnl|LJGI|GO036543 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 782
Score = 355 bits (179), Expect = 3e-97
Identities = 393/463 (84%), Gaps = 1/463 (0%)
Strand = Plus / Plus
Query: 406 gtctcaaataaacttggagctggtaatccacgcgctgcccgtttagcagtgtgtgttgtg 465
||||||||| |||||||||||||| ||||||| ||||| |||||||||||| |||||
Sbjct: 8 gtctcaaatgaacttggagctggtcatccacgggctgcacgtttagcagtggccgttgtc 67
Query: 466 ctaggcatagccattgttgagggcgccttagctgcaacagtgttgatactaatacgcaat 525
||| || |||||| |||| || ||||| || | | ||| || | ||||| || |||
Sbjct: 68 atagtgattgccattattgaaagcatcttagttggagctgtgctggtcctaatccgtaat 127
Query: 526 atctggggccatgcatatagtaatgaagttgaagtggtaaaatatgtagcaactataatg 585
|| ||||| |||| ||||||||||||| |||||||| |||||||| |||||||| |||
Sbjct: 128 atttggggttatgcttatagtaatgaagaagaagtggtcaaatatgttgcaactatgatg 187
Query: 586 ccaattcttgcaacttctcactttttggatgcactccagagcgttctttcaggaactgct 645
|||||||||||| | || ||||| |||| | | |||| ||||||||||| | ||||
Sbjct: 188 ccaattcttgcagcatccaactttctggacggaatccaatctgttctttcaggcaatgct 247
Query: 646 agaggatgtggttggcagaaaatcggtgcatttgtcaatctggggtcatactatttagtt 705
|||||||| |||||||||||||| ||||||||||| ||||||||||| |||||| |||||
Sbjct: 248 agaggatgcggttggcagaaaattggtgcatttgtgaatctggggtcgtactatatagtt 307
Query: 706 ggaattccatcagctattgtgttagcttttgtattgcatcttggcggcaaggggttgtgg 765
||||||||| ||||||| |||||||||||||||||| || |||| || || ||| |||||
Sbjct: 308 ggaattccagcagctatcgtgttagcttttgtattggatattggagggaa-gggctgtgg 366
Query: 766 ctggggatcgtatgtgcactcattgttcaactattttctctaatgatcattactatacgt 825
||||| ||| |||||||||||||||||||| ||||||| |||||||| ||||||||| |
Sbjct: 367 ctgggaatcatatgtgcactcattgttcaagtattttccctaatgattattactatatgg 426
Query: 826 actgattgggagcaagaggcaaagaaggccacagatagagtct 868
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 427 actgattgggagaaagaggcaaagaaggccacagatagagtct 469
>gnl|LJGI|BP069580 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_16, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 483
Score = 293 bits (148), Expect = 9e-79
Identities = 215/236 (91%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 633 ttcaggaactgctagaggatgtggttggcagaaaatcggtgcatttgtcaatctggggtc 692
|||||||||||| ||||||||||||| ||||||||| ||||||||| | |||||||||||
Sbjct: 265 ttcaggaactgcaagaggatgtggtttgcagaaaattggtgcatttattaatctggggtc 206
Query: 693 atactatttagttggaattccatcagctattgtgttagcttttgtattgcatcttggcgg 752
||||||||||||||||||||| | |||||| || |||||||||||||||||| |||| ||
Sbjct: 205 atactatttagttggaattccgttagctatggtcttagcttttgtattgcatattggagg 146
Query: 753 caaggggttgtggctggggatcgtatgtgcactcattgttcaactattttctctaatgat 812
|||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 145 gaaggggctgtggctggggatcatatgtgcactcattgttcaagtattttctctaatgat 86
Query: 813 cattactatacgtactgattgggagcaagaggcaaagaaggccacagatagagtct 868
||||||| | |||| |||||||||| ||||||| ||||||||||| ||||||||||
Sbjct: 85 cattactttgcgtattgattgggagaaagaggc-aagaaggccacggatagagtct 31