Miyakogusa Predicted Gene
- Lj0g3v0349649.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0349649.1 CUFF.24011.1
(311 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70573 367 e-101
gnl|LJGI|TC74735 similar to UniRef100_Q02ZU8 Cluster: ABC transp... 345 1e-94
gnl|LJGI|TC64684 weakly similar to UniRef100_Q9C5S0 Cluster: Cla... 252 1e-66
gnl|LJGI|GO024795 UniRef100_A6LQL9 Cluster: PfkB domain protein;... 216 6e-56
gnl|LJGI|FS338815 weakly similar to UniRef100_A7Q0R1 Cluster: Ch... 62 2e-09
>gnl|LJGI|TC70573
Length = 697
Score = 367 bits (185), Expect = e-101
Identities = 240/257 (93%), Gaps = 6/257 (2%)
Strand = Plus / Plus
Query: 59 atccccaaaccgattcatcactttcttcatcttcaactccaaagcttagggttccttccc 118
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3 atccccaaaccgattcatgactttcttcatcttcaactccaaagcttagggttcgttccc 62
Query: 119 attcccgatctgctgaaccccttcatcctcaatctcttctttttcgatctacggcgcgaa 178
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 63 attcccgatctgctgaaccccttcatcctccatctcttctttttcgatctacgacgcgaa 122
Query: 179 ggttgcttgttgttcgtgactgtcgttcgtttgattatgcgcggttcgtcgtgggtg--- 235
||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 123 ggttgctggttgttcgtgactgtcgttcgttcgattatgcgcggttcgtcgtgggtgggt 182
Query: 236 -gcttgcggtgggtcgcttacggtgattatttgtgtttttctggaagatctgggtatatg 294
|||| |||||||| | || |||||||||||||||||||| |||||||||||||||||
Sbjct: 183 cgcttacggtgggtaggtt--tgtgattatttgtgtttttctagaagatctgggtatatg 240
Query: 295 gtgagggttaactagac 311
|||||||||||||||||
Sbjct: 241 gtgagggttaactagac 257
>gnl|LJGI|TC74735 similar to UniRef100_Q02ZU8 Cluster: ABC transporter, permease
protein; n=1; Lactococcus lactis subsp. cremoris
SK11|Rep: ABC transporter, permease protein -
Lactococcus lactis subsp. cremoris (strain SK11),
partial (3%)
Length = 685
Score = 345 bits (174), Expect = 1e-94
Identities = 264/294 (89%), Gaps = 20/294 (6%)
Strand = Plus / Plus
Query: 23 ttaattatcacccaattcaccactcccaaattcattatccccaaaccgattcatcacttt 82
||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 ttaattatcacccaattcaccactcccaaattcattatccccaaa-------------tt 47
Query: 83 cttcatcttcaactccaaagcttagggttccttcccattcccgatctgctgaaccccttc 142
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 cttcattttcaactccaaagcttagggttccttcccattcccgatctgctgaaccccttc 107
Query: 143 atcctcaatctcttctttttcgatctacggcgcgaaggttgcttgttgttcgtgactgtc 202
|||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 108 atcctccatctcttctttttcgatctacgacgcgaaggttgctggttgttcgtgactgtc 167
Query: 203 gttcgtttgattatgcgcggttc-gtcgtgggtg----gcttgcggtgggtcgcttacgg 257
||||||| ||||||||||||||| |||||||||| |||| |||||||| | || |
Sbjct: 168 gttcgttcgattatgcgcggttctgtcgtgggtgggtcgcttacggtgggtaggtt--tg 225
Query: 258 tgattatttgtgtttttctggaagatctgggtatatggtgagggttaactagac 311
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 226 tgattatttgtgtttttttggaagatctgggtatatggtgagggttaactagac 279
>gnl|LJGI|TC64684 weakly similar to UniRef100_Q9C5S0 Cluster: Classical
arabinogalactan protein 9 precursor; n=1; Arabidopsis
thaliana|Rep: Classical arabinogalactan protein 9
precursor - Arabidopsis thaliana (Mouse-ear cress),
partial (8%)
Length = 638
Score = 252 bits (127), Expect = 1e-66
Identities = 176/191 (92%), Gaps = 6/191 (3%)
Strand = Plus / Plus
Query: 125 gatctgctgaaccccttcatcctcaatctcttctttttcgatctacggcgcgaaggttgc 184
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 2 gatctgctgaaccccttcatcctccatctcttctttttcgatctacgacgcgaaggttgc 61
Query: 185 ttgttgttcgtgactgtcgttcgtttgattatgcgcggttcgtcgtgggtg----gcttg 240
| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 62 tggttgttcgtgactgtcgttcgttcgattatgcgcggttcgtcgtgggtgggtcgctta 121
Query: 241 cggtgggtcgcttacggtgattatttgtgtttttctggaagatctgggtatatggtgagg 300
|||||||| | || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 122 cggtgggtaggtt--tgtgattatttgtgtttttctagaagatctgggtatatggtgagg 179
Query: 301 gttaactagac 311
|||||||||||
Sbjct: 180 gttaactagac 190
>gnl|LJGI|GO024795 UniRef100_A6LQL9 Cluster: PfkB domain protein; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: PfkB domain protein -,
partial (4%)
Length = 660
Score = 216 bits (109), Expect = 6e-56
Identities = 121/125 (96%)
Strand = Plus / Plus
Query: 51 aattcattatccccaaaccgattcatcactttcttcatcttcaactccaaagcttagggt 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 aattcattatccccaaaccgattcatcactttcttcatcttcaactccaaagcttagggt 92
Query: 111 tccttcccattcccgatctgctgaaccccttcatcctcaatctcttctttttcgatctac 170
||||||||||||||||||||||||||||||| |||||| || |||||||||||||||| |
Sbjct: 93 tccttcccattcccgatctgctgaacccctttatcctccatttcttctttttcgatctgc 152
Query: 171 ggcgc 175
|||||
Sbjct: 153 ggcgc 157
>gnl|LJGI|FS338815 weakly similar to UniRef100_A7Q0R1 Cluster: Chromosome chr7
scaffold_42, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_42, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 742
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 257 gtgattatttgtgtttttctggaagatctgggtatatgg 295
||||||||||||||||||||||||||| ||||| |||||
Sbjct: 66 gtgattatttgtgtttttctggaagatatgggtttatgg 104