Miyakogusa Predicted Gene
- Lj0g3v0349149.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0349149.2 tr|F6LPU5|F6LPU5_MEDTR Rop guanine nucleotide
exchange factor OS=Medicago truncatula
GN=MTR_5g081410,78.44,0,PRONE,Plant specific Rop nucleotide exchanger,
PRONE; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT,CUFF.23987.2
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79297 similar to UniRef100_A7PIJ5 Cluster: Chromosome... 1542 0.0
gnl|LJGI|GO012525 similar to UniRef100_A7PNW1 Cluster: Chromosom... 80 3e-14
>gnl|LJGI|TC79297 similar to UniRef100_A7PIJ5 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1034
Score = 1542 bits (778), Expect = 0.0
Identities = 793/798 (99%)
Strand = Plus / Plus
Query: 343 acatcagagcaattctcttcggaatgcctgcttgattgcttagacctctcctctgagcat 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acatcagagcaattctcttcggaatgcctgcttgattgcttagacctctcctctgagcat 61
Query: 403 gttgcactagagattgctaaccgtgttgaagcttcaattcatgtatggcgtcgaagaggt 462
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 62 gttgcactagagattgctaaccgtgtttaagcttcaattcatgtatggcgtcgaagaggt 121
Query: 463 cactctagacccccaccgaatcctagccgttcaactacaaagtcatcatgggaaattgtc 522
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 122 cactctagacccccaccgaatcctagccgttcaactacaaagtcatcttgggaaattgtc 181
Query: 523 aaggacttcatggctgatggagacaagagagagttgctggcagaaagagctgaaaatatt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaggacttcatggctgatggagacaagagagagttgctggcagaaagagctgaaaatatt 241
Query: 583 ctactttcattgaagcagcgattcccgggattaactcaaactaccttggataccagcaaa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctactttcattgaagcagcgattcccgggattaactcaaactaccttggataccagcaaa 301
Query: 643 atccagtgcaacaaggatgttggaaaagccatcctagagggctattcaagagttctggag 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atccagtgcaacaaggatgttggaaaagccatcctagagggctattcaagagttctggag 361
Query: 703 agcatggcatttaacattgtagctcgtatagatgatttgctatatgtggatgacttgaca 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agcatggcatttaacattgtagctcgtatagatgatttgctatatgtggatgacttgaca 421
Query: 763 aaacattcagataggtttccattggtgccaccgacagttaatgtggtttctcagcagaag 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaacattcagataggtttccattggtgccaccgacagttaatgtggtttctcagcagaag 481
Query: 823 ctttcgcgttcaatggcagtgtctgtctcaggcactccgcacaaagcattatcacctgtg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctttcgcgttcaatggcagtgtctgtctcaggcactccgcacaaagcattatcacctgtg 541
Query: 883 cctctaattagtccagcaaggggagatagagagagaactcctttcctcaacatcaacaat 942
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 542 cctctaattagtccggcaaggggagatagagagagatctcctttcctcaacatcaacaat 601
Query: 943 aacaacatcatcaaacctcaacgtcgtggctttggcgtgcgaagagcattgtcaaattat 1002
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 602 aacaacatcatcaaacctcaacgtcgtggctttggcgtgcgaagagcgttgtcaaattat 661
Query: 1003 cttggaggagagaccaaagcaacaaagatgtttagcaatgcaactgaagttaatggtaca 1062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cttggaggagagaccaaagcaacaaagatgtttagcaatgcaactgaagttaatggtaca 721
Query: 1063 aacccaaattgcaataaaacagaacagccagaatgtcagaaggaatcgcatgacatgagg 1122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aacccaaattgcaataaaacagaacagccagaatgtcagaaggaatcgcatgacatgagg 781
Query: 1123 agcaagacaaaataatgg 1140
||||||||||||||||||
Sbjct: 782 agcaagacaaaataatgg 799
>gnl|LJGI|GO012525 similar to UniRef100_A7PNW1 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 620
Score = 79.8 bits (40), Expect = 3e-14
Identities = 133/164 (81%)
Strand = Plus / Plus
Query: 592 ttgaagcagcgattcccgggattaactcaaactaccttggataccagcaaaatccagtgc 651
|||| ||||||||||||||| | ||||||| ||||||| | ||||||||||| |||
Sbjct: 181 ttgatgcagcgattcccgggtctgcctcaaaccgccttggacatgagcaaaatccaatgc 240
Query: 652 aacaaggatgttggaaaagccatcctagagggctattcaagagttctggagagcatggca 711
||||||||||| || ||| |||| |||||| | || |||||||| |||||||| ||||
Sbjct: 241 aacaaggatgtagggaaatccattctagagagttactcaagagtactggagagtttggct 300
Query: 712 tttaacattgtagctcgtatagatgatttgctatatgtggatga 755
| ||| ||||| || || || |||||| |||| ||||| |||||
Sbjct: 301 tctaatattgttgcgcgcattgatgatgtgctctatgtagatga 344