Miyakogusa Predicted Gene
- Lj0g3v0348789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0348789.1 Non Chatacterized Hit- tr|B9SLL6|B9SLL6_RICCO
Putative uncharacterized protein OS=Ricinus communis G,47.62,0.001,
,CUFF.23950.1
(771 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59500 184 5e-46
>gnl|LJGI|TC59500
Length = 848
Score = 184 bits (93), Expect = 5e-46
Identities = 225/269 (83%)
Strand = Plus / Plus
Query: 472 tcaactagtgaagctggtaatcaactttccatcaaggctgtagacactccatcggcaact 531
||||| |||||||||||| | ||||| |||||||||||| |||| |||||| | |||
Sbjct: 535 tcaacaagtgaagctggtgctgaacttctcatcaaggctgttgacattccatcagtaacc 594
Query: 532 agggtaacagggaatcaagttcccatcaaagctacggataccgcatcagcagacaatgaa 591
|| | | | || |||||| || ||||||||||||| || | | | ||||||||| ||||
Sbjct: 595 agtgaacctggtaatcaactttccatcaaagctacagacattgtaccagcagacattgaa 654
Query: 592 tctgattgtaagcctgcaccatctccattgacaaagtcctcacgacctgtggggaagcat 651
| |||||||||||||| || |||||| ||| |||||||||| | ||||||| ||||||
Sbjct: 655 tatgattgtaagcctgtactatctcctttgtcaaagtcctcgcaacctgtgaggaagctc 714
Query: 652 tgtcacaagaagcgtagaccttgccatggctggatttcttatgacaatgacgaagaagac 711
|||||||||||||||| |||||||||||||||||||||| |||| | ||| ||||| |||
Sbjct: 715 tgtcacaagaagcgtaaaccttgccatggctggatttctgatgatagtgaggaagaggac 774
Query: 712 ctgatagaattaccaccagctccattgtc 740
||||||||| |||| ||||||||| ||||
Sbjct: 775 ctgatagaactacctccagctccaatgtc 803
Score = 107 bits (54), Expect = 1e-22
Identities = 98/112 (87%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 161 tatcagcatccagtgaaactggtaatcaacctcccattaagtctatggacattgtatcag 220
||||||||||||||||||||| |||||||| | |||||||| || |||||| |||||
Sbjct: 479 tatcagcatccagtgaaactgataatcaacttgccattaaggctgtggacactgtat--- 535
Query: 221 caacaagtgaagctgttgctgagcttctcataaaggctgatgacatttcatc 272
||||||||||||||| |||||| |||||||| ||||||| ||||||| ||||
Sbjct: 536 caacaagtgaagctggtgctgaacttctcatcaaggctgttgacattccatc 587
Score = 91.7 bits (46), Expect = 6e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 87 ccaggcaacggatgatttgacagaggataacccaggagatggtcccaatgaggcatcc 144
||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 330 ccaggaaacggatgatttgtcagaggataagccaggagatggtcccaatgaggcatcc 387
Score = 81.8 bits (41), Expect = 6e-15
Identities = 117/142 (82%), Gaps = 9/142 (6%)
Strand = Plus / Plus
Query: 269 catccggtgaaactggtaatcaacttcccattaaggctatggagactatatcagcaacaa 328
||||| ||||||||| |||||||||| ||||||||||| |||| ||| ||| ||||||
Sbjct: 485 catccagtgaaactgataatcaacttgccattaaggctgtggacactgtat---caacaa 541
Query: 329 gtgaagctggtgccaagcttttcataaaggctgatgaaatttc------aaccagtgaag 382
||||||||||||| | ||| |||| ||||||| ||| ||| | ||||||||||
Sbjct: 542 gtgaagctggtgctgaacttctcatcaaggctgttgacattccatcagtaaccagtgaac 601
Query: 383 ctggtaatcaacttcccatcaa 404
|||||||||||||| |||||||
Sbjct: 602 ctggtaatcaactttccatcaa 623
Score = 52.0 bits (26), Expect = 5e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 370 tcaaccagtgaagctggtaatcaacttcccatcaaggctgtaggcactccatcagcaaca 429
||||| |||||||||||| | |||||| |||||||||||| | || |||||||| |||
Sbjct: 535 tcaacaagtgaagctggtgctgaacttctcatcaaggctgttgacattccatcagtaacc 594
Query: 430 agtgaa 435
||||||
Sbjct: 595 agtgaa 600