Miyakogusa Predicted Gene
- Lj0g3v0348699.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0348699.1 Non Chatacterized Hit- tr|I1MYK3|I1MYK3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.25,0,RING/U-box,NULL; ZF_RING_2,Zinc finger, RING-type; ZINC
FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTE,CUFF.23943.1
(717 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58685 similar to UniRef100_A7QBV4 Cluster: Chromosome... 1421 0.0
gnl|LJGI|AV417592 similar to UniRef100_A7QBV4 Cluster: Chromosom... 482 e-135
gnl|LJGI|TC82524 similar to UniRef100_A7QBV4 Cluster: Chromosome... 287 5e-77
>gnl|LJGI|TC58685 similar to UniRef100_A7QBV4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1241
Score = 1421 bits (717), Expect = 0.0
Identities = 717/717 (100%)
Strand = Plus / Plus
Query: 1 atggctatgatggcataccaactttctcggttaccttaccaagattccctcaaattactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atggctatgatggcataccaactttctcggttaccttaccaagattccctcaaattactc 391
Query: 61 gaagctgatatacaacacgccaatgctttggctgctgcaattcccacaacaaagggtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gaagctgatatacaacacgccaatgctttggctgctgcaattcccacaacaaagggtggg 451
Query: 121 tctcttcttcagatgaaattggtttgcaatcaattggctcctctttttctattgtttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tctcttcttcagatgaaattggtttgcaatcaattggctcctctttttctattgtttctg 511
Query: 181 caatggatagattgttcttgttcagggtttctgcataggtatcttgacctcttccacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 caatggatagattgttcttgttcagggtttctgcataggtatcttgacctcttccacata 571
Query: 241 gttatatacaaggtaaacagtgatggtcgatcaataatgtccactcatagaagaaaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gttatatacaaggtaaacagtgatggtcgatcaataatgtccactcatagaagaaaggca 631
Query: 301 accattggggacttttatgccgttatattgccatctctccagcggcttcttggtagcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 accattggggacttttatgccgttatattgccatctctccagcggcttcttggtagcttt 691
Query: 361 gataagtctgagctttctgatcaagggccatcaagcatagaaggttcaagatatggcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gataagtctgagctttctgatcaagggccatcaagcatagaaggttcaagatatggcaaa 751
Query: 421 aaggtgattgaaggagatgagaaactaaccaatgttgatttgcaaagggaagatgaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aaggtgattgaaggagatgagaaactaaccaatgttgatttgcaaagggaagatgaatgt 811
Query: 481 gggatttgcttagagccttgcaccaaaattgtgctgccttattgctgtcatgccatgtgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gggatttgcttagagccttgcaccaaaattgtgctgccttattgctgtcatgccatgtgt 871
Query: 541 ataaaatgctactgcaagtggaacagaaagtcagagtcttgccctttttgccgcagtagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 ataaaatgctactgcaagtggaacagaaagtcagagtcttgccctttttgccgcagtagc 931
Query: 601 ttgaggagggttaagtcggaggatctatgggtactaacttgtaatgaagatgttgttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ttgaggagggttaagtcggaggatctatgggtactaacttgtaatgaagatgttgttgat 991
Query: 661 gctgaaacagtttctagggaggacctgttgcatttttacctctatatcaacaagctt 717
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 gctgaaacagtttctagggaggacctgttgcatttttacctctatatcaacaagctt 1048
>gnl|LJGI|AV417592 similar to UniRef100_A7QBV4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 433
Score = 482 bits (243), Expect = e-135
Identities = 243/243 (100%)
Strand = Plus / Plus
Query: 1 atggctatgatggcataccaactttctcggttaccttaccaagattccctcaaattactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 atggctatgatggcataccaactttctcggttaccttaccaagattccctcaaattactc 250
Query: 61 gaagctgatatacaacacgccaatgctttggctgctgcaattcccacaacaaagggtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaagctgatatacaacacgccaatgctttggctgctgcaattcccacaacaaagggtggg 310
Query: 121 tctcttcttcagatgaaattggtttgcaatcaattggctcctctttttctattgtttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tctcttcttcagatgaaattggtttgcaatcaattggctcctctttttctattgtttctg 370
Query: 181 caatggatagattgttcttgttcagggtttctgcataggtatcttgacctcttccacata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caatggatagattgttcttgttcagggtttctgcataggtatcttgacctcttccacata 430
Query: 241 gtt 243
|||
Sbjct: 431 gtt 433
>gnl|LJGI|TC82524 similar to UniRef100_A7QBV4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 786
Score = 287 bits (145), Expect = 5e-77
Identities = 265/305 (86%)
Strand = Plus / Plus
Query: 406 tcaagatatggcaaaaaggtgattgaaggagatgagaaactaaccaatgttgatttgcaa 465
||||| ||||||| ||| ||||||||||| ||| |||| ||| |||||| |||||| ||
Sbjct: 111 tcaagttatggcaggaagatgattgaaggaaatgggaaattaatcaatgtcgatttggaa 170
Query: 466 agggaagatgaatgtgggatttgcttagagccttgcaccaaaattgtgctgccttattgc 525
|| ||||||||||||||||| ||||||||||||||||||||||| || ||||| |||||
Sbjct: 171 agagaagatgaatgtgggatatgcttagagccttgcaccaaaatggttttgcctaattgc 230
Query: 526 tgtcatgccatgtgtataaaatgctactgcaagtggaacagaaagtcagagtcttgccct 585
|||||||| |||||||| ||||||||| |||||||||||| || |||||||| ||
Sbjct: 231 tgtcatgctatgtgtatcaaatgctaccgcaagtggaacacgcgatcggagtcttgtcca 290
Query: 586 ttttgccgcagtagcttgaggagggttaagtcggaggatctatgggtactaacttgtaat 645
||||| || ||||||| ||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 291 ttttgtcgtggtagcttaaggagagttaattctgaggatctatgggtactcacttgtaat 350
Query: 646 gaagatgttgttgatgctgaaacagtttctagggaggacctgttgcatttttacctctat 705
||||||||||||||||||||||||||||| ||||||||| || ||| ||||||||| |||
Sbjct: 351 gaagatgttgttgatgctgaaacagtttccagggaggacttgctgcgtttttacctttat 410
Query: 706 atcaa 710
|||||
Sbjct: 411 atcaa 415