Miyakogusa Predicted Gene

Lj0g3v0348479.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0348479.1 Non Chatacterized Hit- tr|C5YV75|C5YV75_SORBI
Putative uncharacterized protein Sb09g008006
(Fragment,73.33,1e-17,seg,NULL,CUFF.24084.1
         (381 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62933 similar to UniRef100_A7QY98 Cluster: Chromosome...   755   0.0  

>gnl|LJGI|TC62933 similar to UniRef100_A7QY98 Cluster: Chromosome chr2 scaffold_241,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_241, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (94%)
          Length = 730

 Score =  755 bits (381), Expect = 0.0
 Identities = 381/381 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaggaagattgacgaactcagcatcaaggatcttgggtggaaacggcgtcgttctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50  atggcaggaagattgacgaactcagcatcaaggatcttgggtggaaacggcgtcgttctc 109

                                                                       
Query: 61  cgatctgtagcttcctctctccgcctccgttccggcatcggtccccccgtcggcaaacac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 cgatctgtagcttcctctctccgcctccgttccggcatcggtccccccgtcggcaaacac 169

                                                                       
Query: 121 atcgtccctgacaaaccccttcctgcgaatgatgaacttgtgtgggataatggtacttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atcgtccctgacaaaccccttcctgcgaatgatgaacttgtgtgggataatggtacttca 229

                                                                       
Query: 181 ttacccgaaccctgtatagatcgcattgctgatactgttggaaagtatgaagcattggcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ttacccgaaccctgtatagatcgcattgctgatactgttggaaagtatgaagcattggcc 289

                                                                       
Query: 241 tggctctgtgggggattgagttgttttgcgtctctgggattgttggcagtgtggaatgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 tggctctgtgggggattgagttgttttgcgtctctgggattgttggcagtgtggaatgat 349

                                                                       
Query: 301 aaagcctccaagattccatttgcacccaaagtgtatccatatgacaatctggcagcgagg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aaagcctccaagattccatttgcacccaaagtgtatccatatgacaatctggcagcgagg 409

                                
Query: 361 atttgtaatcaaccataggta 381
           |||||||||||||||||||||
Sbjct: 410 atttgtaatcaaccataggta 430