Miyakogusa Predicted Gene

Lj0g3v0348409.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0348409.1 tr|Q2R422|Q2R422_ORYSJ NB-ARC domain containing
protein, expressed OS=Oryza sativa subsp. japonica G,37.31,0.095,
,CUFF.23922.1
         (519 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AI967582 weakly similar to UniRef100_A9F7Y4 Cluster: Tr...   174   3e-43

>gnl|LJGI|AI967582 weakly similar to UniRef100_A9F7Y4 Cluster: Transcriptional
           regulator, LysR family; n=1; Sorangium cellulosum 'So ce
           56'|Rep: Transcriptional regulator, LysR family -
           Sorangium cellulosum (strain So ce56) (Polyangium
           cellulosum (strainSo ce56)), partial (11%)
          Length = 342

 Score =  174 bits (88), Expect = 3e-43
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttaagggttctgtttttccgtccactctcccttcgtggcgtgatgtcgttgtgggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atgcttaagggttctgtttttccgtccactctcccttcgtggcgtgatgtcgttgtgggt 314

                                       
Query: 61  aaactaggagttcgtcttccttcgccgg 88
           ||||||||||||||||||||||||||||
Sbjct: 315 aaactaggagttcgtcttccttcgccgg 342