Miyakogusa Predicted Gene

Lj0g3v0348179.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0348179.1 Non Chatacterized Hit- tr|K4BK97|K4BK97_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,42.72,4e-19,FAMILY NOT NAMED,NULL; seg,NULL; LOB,Lateral organ
boundaries, LOB; DUF260,Lateral organ boundaries,,CUFF.23919.1
         (670 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77154 similar to UniRef100_A7QI27 Cluster: Chromosome...    56   3e-07

>gnl|LJGI|TC77154 similar to UniRef100_A7QI27 Cluster: Chromosome chr17 scaffold_101,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_101, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 450

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 66/76 (86%), Gaps = 2/76 (2%)
 Strand = Plus / Plus

                                                                       
Query: 583 atccaagaagaagttgttgagaattatgatgagat-gaatccgttttttgacaca-attg 640
           |||||| |||||||||||||  ||||||||||||| | |||| ||||||||||||  |||
Sbjct: 2   atccaacaagaagttgttgaagattatgatgagatggcatccattttttgacacagtttg 61

                           
Query: 641 acgacagacaatcata 656
           | || |||||||||||
Sbjct: 62  atgatagacaatcata 77