Miyakogusa Predicted Gene
- Lj0g3v0347519.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0347519.1 Non Chatacterized Hit- tr|I1M4X6|I1M4X6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,56.98,0,GRAS,Transcription factor GRAS; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.23854.1
(2029 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705... 66 9e-10
gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome... 66 9e-10
gnl|LJGI|TC66921 weakly similar to UniRef100_A3E2G3 Cluster: SCA... 66 9e-10
gnl|LJGI|FS353678 weakly similar to UniRef100_A3E2G3 Cluster: SC... 60 6e-08
gnl|LJGI|BP062474 similar to UniRef100_A3E2G3 Cluster: SCARECROW... 60 6e-08
gnl|LJGI|TC76237 similar to UniRef100_A3E2G3 Cluster: SCARECROW-... 60 6e-08
gnl|LJGI|TC70675 similar to UniRef100_A3E2G3 Cluster: SCARECROW-... 56 9e-07
>gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705800 protein; n=1; Oryza
sativa Japonica Group|Rep: Os11g0705800 protein - Oryza
sativa subsp. japonica (Rice), partial (12%)
Length = 724
Score = 65.9 bits (33), Expect = 9e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 1777 atgaatgttgtagcttgtgaaggttgtgaaaggattgagaggcctgagacatataagcaa 1836
|||||||| |||| |||||||||| || ||||||||||||||||||||||| || ||
Sbjct: 656 atgaatgtgatagcatgtgaaggtttggagaggattgagaggcctgagacatacaaacag 597
Query: 1837 tggcagcttagga 1849
|||||| ||||||
Sbjct: 596 tggcaggttagga 584
>gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1057
Score = 65.9 bits (33), Expect = 9e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1777 atgaatgttgtagcttgtgaaggttgtgaaaggattgagaggcctgagacatataagcaa 1836
|||||||| |||| |||||||||| || ||||||||||||||||||||||| || ||
Sbjct: 456 atgaatgtgatagcatgtgaaggtttggagaggattgagaggcctgagacatacaaacag 515
Query: 1837 tggcagcttagga 1849
|||||| ||||||
Sbjct: 516 tggcaggttagga 528
>gnl|LJGI|TC66921 weakly similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1;
n=1; Castanea sativa|Rep: SCARECROW-like protein 1 -
Castanea sativa (Sweet chestnut), partial (27%)
Length = 1180
Score = 65.9 bits (33), Expect = 9e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 1777 atgaatgttgtagcttgtgaaggttgtgaaaggattgagaggcctgagacatataagcaa 1836
|||||||| |||| |||||||||| ||| ||| ||||||||||||||||||| || ||
Sbjct: 439 atgaatgtgatagcatgtgaaggttttgagaggcttgagaggcctgagacatacaaacag 498
Query: 1837 tggcagcttagga 1849
|||||| ||||||
Sbjct: 499 tggcagattagga 511
>gnl|LJGI|FS353678 weakly similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1;
n=1; Castanea sativa|Rep: SCARECROW-like protein 1 -
Castanea sativa (Sweet chestnut), partial (22%)
Length = 764
Score = 60.0 bits (30), Expect = 6e-08
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1776 gatgaatgttgtagcttgtgaaggttgtgaaaggattgagaggcctgagacatataagca 1835
||||||||| |||| |||||||||| | ||| |||||||||||||||||||||| ||
Sbjct: 499 gatgaatgtgatagcatgtgaaggtttggcgagggttgagaggcctgagacatataaaca 440
Query: 1836 atggcagcttagga 1849
|||||| ||||||
Sbjct: 439 gtggcaggttagga 426
>gnl|LJGI|BP062474 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (9%)
Length = 598
Score = 60.0 bits (30), Expect = 6e-08
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 891 agttgtgaatctgaggacactgttgatgcagtgtgcacaagctatttcttctgatgat 948
||||||| |||||||| |||| ||||| | |||||||||||| ||||||||||||||
Sbjct: 489 agttgtggatctgaggtcactattgattctatgtgcacaagctgtttcttctgatgat 546
>gnl|LJGI|TC76237 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (25%)
Length = 754
Score = 60.0 bits (30), Expect = 6e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 1398 ctattgcaatcgtttcaatgttccatttgaattcaatgccattgca 1443
||||||||| |||||||||||||| ||||| | |||||||||||||
Sbjct: 697 ctattgcaagcgtttcaatgttccctttgagtacaatgccattgca 742
>gnl|LJGI|TC70675 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (14%)
Length = 677
Score = 56.0 bits (28), Expect = 9e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1777 atgaatgttgtagcttgtgaaggttgtgaaaggattgagaggcctgagacatataa 1832
|||||||| |||| |||||||||| || ||| ||||||||||||||||||||||
Sbjct: 75 atgaatgtgatagcatgtgaaggtttggagagggttgagaggcctgagacatataa 130