Miyakogusa Predicted Gene
- Lj0g3v0347429.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0347429.1 tr|I3SDU9|I3SDU9_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=2
SV=1,99.57,0,CSA_PPIASE_1,Cyclophilin-type peptidyl-prolyl cis-trans
isomerase, conserved site; seg,NULL; Pro_iso,CUFF.23838.1
(693 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62949 similar to UniRef100_A5C2G6 Cluster: Peptidyl-p... 1374 0.0
gnl|LJGI|TC64874 similar to UniRef100_A7NYF4 Cluster: Peptidyl-p... 117 1e-25
gnl|LJGI|TC61773 similar to UniRef100_A5B709 Cluster: Peptidyl-p... 52 5e-06
>gnl|LJGI|TC62949 similar to UniRef100_A5C2G6 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(84%)
Length = 950
Score = 1374 bits (693), Expect = 0.0
Identities = 693/693 (100%)
Strand = Plus / Plus
Query: 1 atggcgtccagagccactggaacactgatttcggcgtgtttgctatgggttttcttcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 atggcgtccagagccactggaacactgatttcggcgtgtttgctatgggttttcttcctc 140
Query: 61 tgcgcgatcattacattctttcagttcatcttggtagacaacggaaccgaccagaacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tgcgcgatcattacattctttcagttcatcttggtagacaacggaaccgaccagaacaag 200
Query: 121 atcaccaacacaccgcaacatcctcatcacgaggaggaggacgatttggagcgtgtcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcaccaacacaccgcaacatcctcatcacgaggaggaggacgatttggagcgtgtcacc 260
Query: 181 cacaaagtgtattttgatgtagagattgatggaaaatccgcgggtcgcatagtcatgggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaaagtgtattttgatgtagagattgatggaaaatccgcgggtcgcatagtcatgggc 320
Query: 241 ctttttgggagtacagtaccgaaaactgtagaaaactttcgagcgctttgtacaggagag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttttgggagtacagtaccgaaaactgtagaaaactttcgagcgctttgtacaggagag 380
Query: 301 aaaggggtgggaagaagccggaaacctcttcattataaagggagtgcattccacaggata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaggggtgggaagaagccggaaacctcttcattataaagggagtgcattccacaggata 440
Query: 361 ataccaagctttatggtccaggggggtgacttcacccttggtgatggaagaggtggagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataccaagctttatggtccaggggggtgacttcacccttggtgatggaagaggtggagaa 500
Query: 421 tccatctatggtgataagtttgctgatgaaaacttcaagctgaagcatactgggccagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccatctatggtgataagtttgctgatgaaaacttcaagctgaagcatactgggccagga 560
Query: 481 tatctatcgatggcaaattctgggcaagacacaaacggctcccagtttttcataacaaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatctatcgatggcaaattctgggcaagacacaaacggctcccagtttttcataacaaca 620
Query: 541 gtaaaaaccagctggctggatgggcgccatgttgtgttcggcaaggtgctttccggcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtaaaaaccagctggctggatgggcgccatgttgtgttcggcaaggtgctttccggcatg 680
Query: 601 gaggttttgtacaagattgaatcagaaggaagtgaaagtggcttgcccaaaaggaaggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaggttttgtacaagattgaatcagaaggaagtgaaagtggcttgcccaaaaggaaggtt 740
Query: 661 gtcatattggacagtggagaattaacttcatga 693
|||||||||||||||||||||||||||||||||
Sbjct: 741 gtcatattggacagtggagaattaacttcatga 773
>gnl|LJGI|TC64874 similar to UniRef100_A7NYF4 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(95%)
Length = 1003
Score = 117 bits (59), Expect = 1e-25
Identities = 344/439 (78%)
Strand = Plus / Plus
Query: 193 tttgatgtagagattgatggaaaatccgcgggtcgcatagtcatgggcctttttgggagt 252
|||||||| |||||||||||||| | || ||||| || || ||||| || | |||||
Sbjct: 182 tttgatgttgagattgatggaaaggctgcaggtcgtatcgtaatgggtctatatgggaag 241
Query: 253 acagtaccgaaaactgtagaaaactttcgagcgctttgtacaggagagaaaggggtggga 312
||||| || |||||| ||||||||| ||||| ||||| ||||| || || || | ||
Sbjct: 242 acagttccagaaactgcagaaaacttccgagctctttgcacaggggaaaagggaattggt 301
Query: 313 agaagccggaaacctcttcattataaagggagtgcattccacaggataataccaagcttt 372
| ||| | || ||||| |||| ||||| ||| ||||||| ||||| || || ||||||
Sbjct: 302 aaaagtggaaagcctctccatttcaaaggtagttcattccataggattattcctagcttt 361
Query: 373 atggtccaggggggtgacttcacccttggtgatggaagaggtggagaatccatctatggt 432
||| |||| || ||||| || |||| || |||||| ||||||||||| || |||||
Sbjct: 362 atgatccaaggaggtgattttacccaaggcaatggaatgggtggagaatcaatttatggg 421
Query: 433 gataagtttgctgatgaaaacttcaagctgaagcatactgggccaggatatctatcgatg 492
|| |||||| ||||||| ||||||||| | ||||||||||| |||||| |||||| |||
Sbjct: 422 gagaagtttcctgatgagaacttcaagttaaagcatactggaccaggacttctatcaatg 481
Query: 493 gcaaattctgggcaagacacaaacggctcccagtttttcataacaacagtaaaaaccagc 552
||||| |||| | || || || || || || |||||||| ||||| || | |||||||
Sbjct: 482 gcaaacgctggtcctgataccaatggttcacaatttttcattacaactgtgacaaccagc 541
Query: 553 tggctggatgggcgccatgttgtgttcggcaaggtgctttccggcatggaggttttgtac 612
||| ||||||| | |||||||| || || || |||||||| || ||||| ||| | |||
Sbjct: 542 tggttggatggaaggcatgttgtttttggaaaagtgctttcgggaatggatgttgtttac 601
Query: 613 aagattgaatcagaaggaa 631
||||| ||| | |||||||
Sbjct: 602 aagatggaagctgaaggaa 620
>gnl|LJGI|TC61773 similar to UniRef100_A5B709 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=2; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), complete
Length = 727
Score = 52.0 bits (26), Expect = 5e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 436 aagtttgctgatgaaaacttcaagctgaagcatactgg 473
|||||||||||||| || |||||||||||||| |||||
Sbjct: 327 aagtttgctgatgagaatttcaagctgaagcacactgg 364