Miyakogusa Predicted Gene
- Lj0g3v0346729.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0346729.1 Non Chatacterized Hit- tr|I3T5L3|I3T5L3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,76.21,0,seg,NULL; Tetraspannin,Tetraspanin/Peripherin; SUBFAMILY
NOT NAMED,NULL; TETRASPANIN,NULL,CUFF.23791.1
(747 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67653 weakly similar to UniRef100_A7Q1F8 Cluster: Chr... 1481 0.0
gnl|LJGI|AV766067 186 1e-46
gnl|LJGI|FS336425 111 6e-24
>gnl|LJGI|TC67653 weakly similar to UniRef100_A7Q1F8 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (77%)
Length = 1077
Score = 1481 bits (747), Expect = 0.0
Identities = 747/747 (100%)
Strand = Plus / Plus
Query: 1 atgcgccctaattgttgccacgtttcccttgctttcgttcttaagttcctgaatttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgcgccctaattgttgccacgtttcccttgctttcgttcttaagttcctgaatttcctt 179
Query: 61 caagcctttgttggggtttcaattctgctctattccgtatggatgctcaatcaatgggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 caagcctttgttggggtttcaattctgctctattccgtatggatgctcaatcaatgggac 239
Query: 121 catcgtgtccctcaaccacctcttcctcatatttctctccctcgcatcgtctctgccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 catcgtgtccctcaaccacctcttcctcatatttctctccctcgcatcgtctctgccatc 299
Query: 181 aatgtcaattctctcaacctccctgctccttggttcatctatgctttcatgggtgtgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aatgtcaattctctcaacctccctgctccttggttcatctatgctttcatgggtgtgggg 359
Query: 241 atattgatgtgctgcattactttcttgggttgcattgcagctgaaatgataaatggtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atattgatgtgctgcattactttcttgggttgcattgcagctgaaatgataaatggtttc 419
Query: 301 tgcttgtgtttttacactctaatcatcaccgtactcgttctagcggaggctgccctggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgcttgtgtttttacactctaatcatcaccgtactcgttctagcggaggctgccctggtg 479
Query: 361 ggattcattgcaattgatcatcattggcgagaggatattccagttgatccgactggtcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggattcattgcaattgatcatcattggcgagaggatattccagttgatccgactggtcaa 539
Query: 421 cttgagagccttcaatctttcattgaagaaaaccaagatatatgtagatgggttggaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 cttgagagccttcaatctttcattgaagaaaaccaagatatatgtagatgggttggaatt 599
Query: 481 tctgtgcttgtaattcaggcgttgtctttgttactggcattaattttacgagccacaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tctgtgcttgtaattcaggcgttgtctttgttactggcattaattttacgagccacaatt 659
Query: 541 tctactcggagagctgattttgattatgaggatgaatatgatgttaggggtagaagttgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tctactcggagagctgattttgattatgaggatgaatatgatgttaggggtagaagttgg 719
Query: 601 gagcccctactaaatcctcaatctggccaaccttctgggtcgggcaaagttgataaccga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gagcccctactaaatcctcaatctggccaaccttctgggtcgggcaaagttgataaccga 779
Query: 661 ggaaaccactctgacatttggagctcacggatgagagagaagtacggattgaacaatggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ggaaaccactctgacatttggagctcacggatgagagagaagtacggattgaacaatggt 839
Query: 721 gataagcaaagccaccaagtatgaatt 747
|||||||||||||||||||||||||||
Sbjct: 840 gataagcaaagccaccaagtatgaatt 866
>gnl|LJGI|AV766067
Length = 350
Score = 186 bits (94), Expect = 1e-46
Identities = 133/146 (91%)
Strand = Plus / Minus
Query: 602 agcccctactaaatcctcaatctggccaaccttctgggtcgggcaaagttgataaccgag 661
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 350 agcccctactaaatcctcaatctggccacccttctgggtcgggcaaagttaataaccgag 291
Query: 662 gaaaccactctgacatttggagctcacggatgagagagaagtacggattgaacaatggtg 721
|||||| |||| |||||||||||| ||||||| | | ||||||||||||| |||||||
Sbjct: 290 gaaacccctctcccatttggagctcccggatgaaaaaaaagtacggattgaccaatggtt 231
Query: 722 ataagcaaagccaccaagtatgaatt 747
||||||||| || |||||||||||||
Sbjct: 230 ataagcaaaccccccaagtatgaatt 205
>gnl|LJGI|FS336425
Length = 682
Score = 111 bits (56), Expect = 6e-24
Identities = 87/96 (90%), Gaps = 1/96 (1%)
Strand = Plus / Plus
Query: 31 gctttcgttcttaagttcctgaatttccttcaagcctttgttggggtttcaattctgctc 90
||||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 563 gctttagttctcaagttccttaatttccttcaagcctttcttggggtttcaattctgctc 622
Query: 91 tattccgtatggatgctcaatcaatgggaccatcgt 126
| || |||||| |||| ||||||||||||||||||
Sbjct: 623 t-gtctgtatggttgctgaatcaatgggaccatcgt 657