Miyakogusa Predicted Gene

Lj0g3v0346709.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0346709.1 tr|G7L0T6|G7L0T6_MEDTR Benzoyl coenzyme A benzyl
alcohol benzoyl transferase OS=Medicago truncatula
,41.57,0.000000000000007,PREDICTED PROTEIN (FRAGMENT),NULL;
GAG-POL-RELATED RETROTRANSPOSON,NULL;
gag_pre-integrs,GAG-pre-int,CUFF.23793.1
         (426 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP058111                                                     555   e-158
gnl|LJGI|TC73189                                                      476   e-134

>gnl|LJGI|BP058111 
          Length = 570

 Score =  555 bits (280), Expect = e-158
 Identities = 338/360 (93%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtactggaaatacatcaggaacgccctaccctgaagacgattggtgcagctgaggag 60
           ||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 360 atggttctggcaatacatcaggaacgccctaccctgaagatgattggtgcagctgaggag 301

                                                                       
Query: 61  aggggtggtttatatgcagtgatagatccagcagtcaaggccaagcatccaccagctgaa 120
           ||||||| |||||||||| ||||||||||||||||||||| ||||||||| |||| ||||
Sbjct: 300 aggggtgatttatatgcactgatagatccagcagtcaaggtcaagcatcccccagttgaa 241

                                                                       
Query: 121 ggcaacatcaagactcaagtctctcatttcaatttctgccaatttgattgtaatttgtgg 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gacaacatcaagactcaagtctctcatttcaatttctgccaatttgattgtaatttgtgg 181

                                                                       
Query: 181 catttgcgattaggacacacttcttctaagaagttagctattcctcagaaaattttccct 240
           ||||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||||
Sbjct: 180 catttacgattaggacacacttcttctaagaagttagccattcttcagaaaaatttccct 121

                                                                       
Query: 241 tttattacttgtaagcagattacttctccttgtgatacttgccatatggcaaaacnnnnn 300
           ||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
Sbjct: 120 tttattacttgtaagaagattacttctccttgtgatacttgccatatggcaaaacaaaaa 61

                                                                       
Query: 301 nnnttgtcttttccaaatagtgtaacattgtcttctgagatttttgatcttattcacact 360
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  aaattgtcttttccaaatagtgtaacattgtcttctgagatttttgatcttattcacact 1


>gnl|LJGI|TC73189 
          Length = 828

 Score =  476 bits (240), Expect = e-134
 Identities = 264/272 (97%)
 Strand = Plus / Plus

                                                                       
Query: 20  aggaacgccctaccctgaagacgattggtgcagctgaggagaggggtggtttatatgcag 79
           ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aggaacgccctgccctgaagatgattggtgcagctgaggagaggggtggtttatatgcag 616

                                                                       
Query: 80  tgatagatccagcagtcaaggccaagcatccaccagctgaaggcaacatcaagactcaag 139
           ||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||
Sbjct: 617 tgatagatccagcagtcaaggtcaagcatcccccagttgaaggcaacatcaagactcaag 676

                                                                       
Query: 140 tctctcatttcaatttctgccaatttgattgtaatttgtggcatttgcgattaggacaca 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tctctcatttcaatttctgccaatttgattgtaatttgtggcatttgcgattaggacaca 736

                                                                       
Query: 200 cttcttctaagaagttagctattcctcagaaaattttcccttttattacttgtaagcaga 259
           ||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||
Sbjct: 737 cttcttctaagaagttagccattcttcagaaaaatttcccttttattacttgtaagcaga 796

                                           
Query: 260 ttacttctccttgtgatacttgccatatggca 291
           ||||||||||||||||||||||||||||||||
Sbjct: 797 ttacttctccttgtgatacttgccatatggca 828