Miyakogusa Predicted Gene
- Lj0g3v0346499.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0346499.1 tr|G7IT89|G7IT89_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_2g066150 PE=4 SV=1,36.67,2e-17,F_box_assoc_1: F-box
protein interaction domain,F-box associated interaction domain;
seg,NULL; FBA_1,CUFF.23776.1
(1156 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77125 weakly similar to UniRef100_A2Q228 Cluster: Cyc... 2252 0.0
gnl|LJGI|GO010439 similar to UniRef100_A2Q609 Cluster: Cyclin-li... 440 e-123
>gnl|LJGI|TC77125 weakly similar to UniRef100_A2Q228 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago truncatula|Rep:
Cyclin-like F-box; F-box protein interaction domain -
Medicago truncatula (Barrel medic), partial (32%)
Length = 1362
Score = 2252 bits (1136), Expect = 0.0
Identities = 1142/1144 (99%)
Strand = Plus / Plus
Query: 13 ctggttcacaaatcatgggctgatttactcgaaatccctcatttcatgagcaaattcgta 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ctggttcacaaatcatgggctgatttactcgaaatccctcatttcatgagcaaattcgta 124
Query: 73 tccaaacatcactcttatcacgatgatacatctttccttctcttacagcagcagccatca 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tccaaacatcactcttatcacgatgatacatctttccttctcttacagcagcagccatca 184
Query: 133 gatttcatccattatcacggttcattgtatctgctttcaggtgacaaatttgagaaaaca 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gatttcatccattatcacggttcattgtatctgctttcaggtgacaaatttgagaaaaca 244
Query: 193 gtcaaatcagattcgcttccatatcaagagcatcgcagattccttagggtttcgggttcc 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtcaaatcagattcgcttccatatcaagagcatcgcagattccttagggtttcgggttcc 304
Query: 253 ggtattcatggcattcgttgtctccatgaagtaccagactataagtatgtattgtggaac 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggtattcatggcattcgttgtctccatgaagtaccagactataagtatgtattgtggaac 364
Query: 313 ccagctactaatgaattcagagttactcctcccagccctcgagagtctgtaccttattat 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccagctactaatgaattcagagttactcctcccagccctcgagagtctgtaccttattat 424
Query: 373 gatccatgtattactactcatggatttggttatgatcatgttaccgatgactttaaggtc 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gatccatgtattactactcatggatttggttatgatcatgttaccgatgactttaaggtc 484
Query: 433 attcgccatataacattttatccggaatttgaaaaagaagatcatagggaaccagatgag 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 attcgccatataacattttatccggaatttgaaaaagaagatcatagggaaccagatgag 544
Query: 493 gacgaagatgatgattggcaagttgaagttgaagttgaaaatgatcggcaagatgagccg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 545 gacgaagatgatgattggcaagttgaagttgaagttgaaaatgatcggcaagatgagtcg 604
Query: 553 atgataccagaccagtttccatgtccaacatcacagcccttctgggaaatatatagccta 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atgataccagaccagtttccatgtccaacatcacagcccttctgggaaatatatagccta 664
Query: 613 agaagcaactcttggaggaaactggatactgatatgcctattatcggaagtggttccggt 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 agaagcaactcttggaggaaactggatactgatatgcctattatcggaagtggttccggt 724
Query: 673 atgggttatgacatttacacgaacggagtgtgtcattggttgggtttgaataagtgtggt 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 atgggttatgacatttacacgaacggagtgtgtcattggttgggtttgaataagtgtggt 784
Query: 733 ttagaaatatatttggggtcattcaactttagcaatgagatattctacacaacgccctta 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ttagaaatatatttggggtcattcaactttagcaatgagatattctacacaacgccctta 844
Query: 793 ccgttagatctggctgatacaaggaagcagaactacttggcagtgttaaatgagtccatt 852
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 845 ccgttagatctggctgatacagggaagcagaactacttggcagtgttaaatgagtccatt 904
Query: 853 gcattgatatcaatacatgaagaaacaacaacttttcacatatggattttgggtgagctc 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 gcattgatatcaatacatgaagaaacaacaacttttcacatatggattttgggtgagctc 964
Query: 913 tgtgcaaaggaatcatggactaaacttttcactgttggacttggacccttgcatggcttt 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 tgtgcaaaggaatcatggactaaacttttcactgttggacttggacccttgcatggcttt 1024
Query: 973 gggcttcctattggagtagggaagatgggcgatatattcttcagaaaagaaaatggtgaa 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 gggcttcctattggagtagggaagatgggcgatatattcttcagaaaagaaaatggtgaa 1084
Query: 1033 ctagccttgttcgatttaagtactcatatgctcaaggagattgctgctacagaggtgtta 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 ctagccttgttcgatttaagtactcatatgctcaaggagattgctgctacagaggtgtta 1144
Query: 1093 gagtatgatcagataataatctataaggaaagcattcttccgattggaagaacaggttat 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 gagtatgatcagataataatctataaggaaagcattcttccgattggaagaacaggttat 1204
Query: 1153 tgat 1156
||||
Sbjct: 1205 tgat 1208
>gnl|LJGI|GO010439 similar to UniRef100_A2Q609 Cluster: Cyclin-like F-box; F-box
protein interaction domain; n=1; Medicago
truncatula|Rep: Cyclin-like F-box; F-box protein
interaction domain - Medicago truncatula (Barrel medic),
partial (18%)
Length = 736
Score = 440 bits (222), Expect = e-123
Identities = 395/455 (86%), Gaps = 12/455 (2%)
Strand = Plus / Plus
Query: 13 ctggttcacaaatcatgggctgatttactcgaaatccctcatttcatgagca-------- 64
||||||||||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 109 ctggttcacaaatcatgggttgatttacatgaaatcccttatttcatgagcatgtttcgc 168
Query: 65 ----aattcgtatccaaacatcactcttatcacgatgatacatctttccttctcttacag 120
| ||| ||||||||||||| |||||| |||||||||||||| ||||| ||||||||
Sbjct: 169 agcaatttcttatccaaacatcaatcttattacgatgatacatctctccttgtcttacag 228
Query: 121 cagcagccatcagatttcatccattatcacggttcattgtatctgctttcaggtgacaaa 180
||||||||||||||| || ||||| || ||||||||||| | ||||||| ||||||||
Sbjct: 229 cagcagccatcagatggcacccattgtcccggttcattgtttttgctttctggtgacaat 288
Query: 181 tttgagaaaacagtcaaatcagattcgcttccatatcaagagcatcgcagattccttagg 240
|||||||||||||||| |||||||| ||||||||||||||| ||| |||||||||||||
Sbjct: 289 tttgagaaaacagtcagatcagattggcttccatatcaagaacatggcagattccttagt 348
Query: 241 gtttcgggttccggtattcatggcattcgttgtctccatgaagtaccagactataagtat 300
|||| |||||| |||||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct: 349 gttttgggttcgggtattcatggcattctttgtctccatgaagcaccagattataagtat 408
Query: 301 gtattgtggaacccagctactaatgaattcagagttactcctcccagccctcgagagtct 360
||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 409 gtattgtggaacccagctactgaagaattcagagttactcctcccagccctagagagtct 468
Query: 361 gtaccttattatgatccatgtattactactcatggatttggttatgatcatgttaccgat 420
||||||||| || | | ||||| ||||||||||||||||||||| | |||| |||
Sbjct: 469 ctaccttattgggaggcttatattaaacctcatggatttggttatgatcctattactgat 528
Query: 421 gactttaaggtcattcgccatataacattttatcc 455
|||||||||||| |||| |||||||| ||||||||
Sbjct: 529 gactttaaggtccttcggcatataactttttatcc 563
Score = 95.6 bits (48), Expect = 6e-19
Identities = 88/100 (88%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 533 atgatcggcaagatgagccgatgataccagaccagtttccatgtccaacatcacagccct 592
|||||| |||||||||||| ||||| ||||||| || ||| ||| || | |||| ||||
Sbjct: 638 atgatctgcaagatgagccaatgatctcagaccacttaccaagtcgaata-cacaaccct 696
Query: 593 tctgggaaatatatagcctaagaagcaactcttggaggaa 632
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 697 tctgggagatatatagcctaagaagcaactcttggaggaa 736