Miyakogusa Predicted Gene

Lj0g3v0346389.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0346389.1 Non Chatacterized Hit- tr|B7ZZH6|B7ZZH6_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,37.1,0.88,
,gene.g27132.t1.1
         (268 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79386 similar to UniRef100_Q2HUG6 Cluster: Peptidase ...   355   9e-98

>gnl|LJGI|TC79386 similar to UniRef100_Q2HUG6 Cluster: Peptidase C14, caspase
           catalytic subunit p20; n=1; Medicago truncatula|Rep:
           Peptidase C14, caspase catalytic subunit p20 - Medicago
           truncatula (Barrel medic), partial (92%)
          Length = 1179

 Score =  355 bits (179), Expect = 9e-98
 Identities = 233/251 (92%)
 Strand = Plus / Minus

                                                                       
Query: 13  gaaggcagcattagcattctcatcactgcaataaaggcaaggatgctgcacaattccctg 72
           ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 998 gaaggtagcattagcattctcatcactgcaatagaggcaaggatgctgcataattccctg 939

                                                                       
Query: 73  tgtttgaagcacattcctggccttcatcacaacttctctattgctcagctgacccgggtt 132
           |||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 938 tgtttgcagcatattcctggccttcaccacaacctctctattgctcagctgacccgggtt 879

                                                                       
Query: 133 ctccttcaacaccatctgaaccgcattgctaaatgctccatacgcctttccgccactcat 192
           ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||   
Sbjct: 878 ctccttcaaaaccatctgaaccgcattgctgaatgctccatacgcctttccgccacttgc 819

                                                                       
Query: 193 gttcgggttaatgtctgcagaggtctcatcagattggcaaccactcaacagaatcccctc 252
           ||||||||| |||||||||||||||||||||| |||||||||||| |  ||||| |||||
Sbjct: 818 gttcgggttcatgtctgcagaggtctcatcagcttggcaaccactaagtagaatgccctc 759

                      
Query: 253 atcaggcctca 263
           |||||||||||
Sbjct: 758 atcaggcctca 748