Miyakogusa Predicted Gene

Lj0g3v0346119.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0346119.1 Non Chatacterized Hit- tr|E0VEP1|E0VEP1_PEDHC
Protein SET, putative OS=Pediculus humanus subsp.
corp,33.13,6e-18,SUBFAMILY NOT NAMED,NULL; TESTIS-SPECIFIC Y-ENCODED
PROTEIN,Nucleosome assembly protein (NAP);
NAP,N,NODE_56738_length_914_cov_41.086433.path2.1
         (567 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57374 weakly similar to UniRef100_Q9M9V0 Cluster: F6A...  1124   0.0  
gnl|LJGI|TC60758 similar to UniRef100_Q9M9V0 Cluster: F6A14.10 p...   190   6e-48

>gnl|LJGI|TC57374 weakly similar to UniRef100_Q9M9V0 Cluster: F6A14.10 protein; n=1;
           Arabidopsis thaliana|Rep: F6A14.10 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (29%)
          Length = 1224

 Score = 1124 bits (567), Expect = 0.0
 Identities = 567/567 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagaagttggaggagatggaagataagatcaatctgatccatatgatggctttccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atggagaagttggaggagatggaagataagatcaatctgatccatatgatggctttccaa 203

                                                                       
Query: 61  gtcgatgactacaaggagagactaaagtcggcgtatcaggagcggagcaagattatcgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gtcgatgactacaaggagagactaaagtcggcgtatcaggagcggagcaagattatcgat 263

                                                                       
Query: 121 tctatccccggtttctggtttactgttgttcttctcaagcatcctgcctaccgtcaactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tctatccccggtttctggtttactgttgttcttctcaagcatcctgcctaccgtcaactt 323

                                                                       
Query: 181 ttcaaccaggaagatcataagatatttcagtattttacttctcttgaggttgaagatgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttcaaccaggaagatcataagatatttcagtattttacttctcttgaggttgaagatgat 383

                                                                       
Query: 241 atggatgtcaactcaagctactcaatcacctttaatttcaaacccaatccatattttgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atggatgtcaactcaagctactcaatcacctttaatttcaaacccaatccatattttgag 443

                                                                       
Query: 301 aatacaaagcttcaaaagactttaaccttccttcaagaaggaactacaaaaattactgcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatacaaagcttcaaaagactttaaccttccttcaagaaggaactacaaaaattactgcc 503

                                                                       
Query: 361 acaccaattaaatggaagcagaacaaccaagttcctgctgatttcggtttcttttcttgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acaccaattaaatggaagcagaacaaccaagttcctgctgatttcggtttcttttcttgg 563

                                                                       
Query: 421 tttactatgactgagcagaaagatgatgtgcatcacattcatgatgagattgcgtgctta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttactatgactgagcagaaagatgatgtgcatcacattcatgatgagattgcgtgctta 623

                                                                       
Query: 481 ttcaaagatgatgtttggaagtatgcacttttctatttcaaaatggagtcttacgatagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttcaaagatgatgtttggaagtatgcacttttctatttcaaaatggagtcttacgatagt 683

                                      
Query: 541 gatgaggaatgggttgactcatgactg 567
           |||||||||||||||||||||||||||
Sbjct: 684 gatgaggaatgggttgactcatgactg 710


>gnl|LJGI|TC60758 similar to UniRef100_Q9M9V0 Cluster: F6A14.10 protein; n=1;
           Arabidopsis thaliana|Rep: F6A14.10 protein - Arabidopsis
           thaliana (Mouse-ear cress), partial (85%)
          Length = 1079

 Score =  190 bits (96), Expect = 6e-48
 Identities = 165/188 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 gaagatcataagatatttcagtattttacttctcttgaggttgaagatgatatggatgtc 249
           |||||||| ||||||||| ||||||| ||||||||||||||||||||| ||| |||||||
Sbjct: 370 gaagatcagaagatatttaagtatttgacttctcttgaggttgaagattataaggatgtc 429

                                                                       
Query: 250 aactcaagctactcaatcacctttaatttcaaacccaatccatattttgagaatacaaag 309
           || ||| |||||||||||||||| ||||||||||||||||||||||||||| || | |||
Sbjct: 430 aagtcaggctactcaatcaccttcaatttcaaacccaatccatattttgaggatgctaag 489

                                                                       
Query: 310 cttcaaaagactttaaccttccttcaagaaggaactacaaaaattactgccacaccaatt 369
           |||   |||||||| ||||||||| |||||||||  |||||  ||||||| ||||| |||
Sbjct: 490 cttgttaagacttttaccttccttgaagaaggaataacaaaggttactgctacacccatt 549

                   
Query: 370 aaatggaa 377
           || |||||
Sbjct: 550 aagtggaa 557



 Score = 58.0 bits (29), Expect = 6e-08
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                       
Query: 393 tcctgctgatttcggtttcttttcttggtttactatgactgagcagaaagatgatgtgca 452
           ||||| |||| || |||||||| |||||||| ||   |||||||||||||||||| || |
Sbjct: 615 tcctgttgatgtcagtttctttacttggtttgctcacactgagcagaaagatgatatgga 674

                                
Query: 453 tcacattcatgatgagattgc 473
           | |||||||||| ||| ||||
Sbjct: 675 tgacattcatgacgaggttgc 695