Miyakogusa Predicted Gene
- Lj0g3v0345929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0345929.1 tr|Q2LAJ4|Q2LAJ4_SOLLC Auxin response factor 3
OS=Solanum lycopersicum GN=ARF3 PE=2 SV=1,32.92,8e-16,Auxin_resp,Auxin
response factor; FAMILY NOT NAMED,NULL,CUFF.23830.1
(1023 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81860 similar to UniRef100_A2Q532 Cluster: Transcript... 1205 0.0
gnl|LJGI|TC57738 similar to UniRef100_A2Q532 Cluster: Transcript... 80 3e-14
>gnl|LJGI|TC81860 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3; Auxin
response factor; n=1; Medicago truncatula|Rep:
Transcriptional factor B3; Auxin response factor -
Medicago truncatula (Barrel medic), partial (3%)
Length = 882
Score = 1205 bits (608), Expect = 0.0
Identities = 617/620 (99%)
Strand = Plus / Plus
Query: 404 gtggctttggagtttttgatggttaccaggtgctgagatccagaaatggatggtcaaccc 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggctttggagtttttgatggttaccaggtgctgagatccagaaatggatggtcaaccc 60
Query: 464 atatgaacaaccatccttcacatttgcatcaatctgttccagccgggcaagtttcatctc 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atatgaacaaccatccttcacatttgcatcaatctgttccagccgggcaagtttcatctc 120
Query: 524 cttcatctgtgttaacgtttcagcaatcaatcaatcaaggtgtgaacttggagaccaata 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttcatctgtgttaacgtttcagcaatcaatcaatcaaggtgtgaacttggagaccaata 180
Query: 584 acaaaaccaatcaggtgatggagggtagagtccaccaccaaggcttatatccttcaacaa 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaaaaccaatcaggtgatggagggtagagtccaccaccaaggcttatatccttcaacaa 240
Query: 644 tgaaaggtggaacgtttgtatcaaccccctcttgtgagcctagtttccgccggcaagctc 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaaaggtggaacgtttgtatcaaccccctcttgtgagcctagtttccgccggcaagctc 300
Query: 704 aggaagatgctaattctttgggttttataaatttgcataatcagttggatagttcacact 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggaagatgctaattctttgggttttataaatttgcataatcagttggatagttcacact 360
Query: 764 cacatgatcctatttcactactgagaggccctcaagaggtggtttcctcatgtaaaagta 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacatgatcctatttcactactgagaggccctcaagaggtggtttcctcatgtaaaagta 420
Query: 824 gctgcagagtctttggtttttcattaactgagggtgctcgcagtgcaaatgaggaggctg 883
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgcagagtctttggtttttcagtaactgagggtgctcgcagtgcaaatgaggaggctg 480
Query: 884 acccatctacagtcacttgtcaattaaatcctggaacttcttttatcagacacgtcgaag 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acccatctacagtcacttgtcaattaaatcctggaacttcttttatcagacacgtcgaag 540
Query: 944 atgatttccgtccaaggcattcgcttcggagcaaggcagttggaaaatattgtagcaaag 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atgatttccgtccaaggcattcgcttcggagcaaggcagttggaaaatattgtagcaaag 600
Query: 1004 tattgctgcagtattgagtt 1023
| |||||||||||||||||
Sbjct: 601 aagtgctgcagtattgagtt 620
>gnl|LJGI|TC57738 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3;
Auxin response factor; n=1; Medicago truncatula|Rep:
Transcriptional factor B3; Auxin response factor -
Medicago truncatula (Barrel medic), partial (15%)
Length = 926
Score = 79.8 bits (40), Expect = 3e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 795 tcaagaggtggtttcctcatgtaaaagtagctgcagagtctttggtttttcattaactga 854
||||||| ||||| ||||||| |||||| |||||||| ||||||||||||||||||||||
Sbjct: 406 tcaagagttggttccctcatgcaaaagtggctgcagactctttggtttttcattaactga 465
Score = 60.0 bits (30), Expect = 3e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 479 cttcacatttgcatcaatctgttccagccgggcaagtttcatctccttcatctgtgttaa 538
||||||||||||| ||| ||| || |||||||||| |||||||| |||||||||||||
Sbjct: 99 cttcacatttgcacacatcagttacatccgggcaagtgtcatctccatcatctgtgttaa 158
Query: 539 cgtttcagca 548
||| |||||
Sbjct: 159 tgttccagca 168