Miyakogusa Predicted Gene

Lj0g3v0345379.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0345379.2 CUFF.23694.2
         (537 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP054306                                                     268   3e-71

>gnl|LJGI|BP054306 
          Length = 498

 Score =  268 bits (135), Expect = 3e-71
 Identities = 141/143 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gattagaggatatctacttcatcactggacttcccatagatgggatccaggtgtctggtt 64
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 231 gattagaagatatctacttcatcactggacttcccatagatgggatccaggtgtctggat 290

                                                                       
Query: 65  atgttacttatgaggctgtggacttagtcatgaagcatttaaatttgaaggattatcaag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgttacttatgaggctgtggacttagtcatgaagcatttaaatttgaaggattatcaag 350

                                  
Query: 125 caagagatttgctcataaaaggt 147
           |||||||||||||||||||||||
Sbjct: 351 caagagatttgctcataaaaggt 373



 Score =  161 bits (81), Expect = 5e-39
 Identities = 89/92 (96%)
 Strand = Plus / Plus

                                                                       
Query: 391 ggtatttgcattagagcggttccccttcataaagaacgcatttgttttaccacctataca 450
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 371 ggtatttgcattagagcggttccccttcataaggaacgcatttgttttaccacctataca 430

                                           
Query: 451 acccctgtttttgacctggatagatgtggtgt 482
           |||| ||||||||||||| |||||||||||||
Sbjct: 431 acccgtgtttttgacctgnatagatgtggtgt 462