Miyakogusa Predicted Gene

Lj0g3v0345299.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0345299.1 Non Chatacterized Hit- tr|J3LQI0|J3LQI0_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G3,27.47,8e-19,DEAD,DNA/RNA helicase, DEAD/DEAH box type,
N-terminal; HELICASE-RELATED,NULL; P-loop containing
nucl,gene.g27047.t1.1
         (900 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598262 weakly similar to UniRef100_Q1KL58 Cluster: Di...   654   0.0  
gnl|LJGI|GO019063 similar to UniRef100_A7P8Q9 Cluster: Chromosom...    86   4e-16
gnl|LJGI|AV412624 similar to UniRef100_A4CPG1 Cluster: Na(+)-tra...    76   4e-13
gnl|LJGI|TC59069 similar to UniRef100_Q5IFH7 Cluster: Triterpene...    74   2e-12
gnl|LJGI|BP064555 homologue to UniRef100_Q2Q679 Cluster: Cytochr...    72   7e-12

>gnl|LJGI|DC598262 weakly similar to UniRef100_Q1KL58 Cluster: Dicer-like 2 spliceform
           1; n=1; Arabidopsis thaliana|Rep: Dicer-like 2
           spliceform 1 - Arabidopsis thaliana (Mouse-ear cress),
           partial (7%)
          Length = 526

 Score =  654 bits (330), Expect = 0.0
 Identities = 340/342 (99%), Gaps = 1/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttataaaa-gacattgctcaagctatcaagtctagtggcaagaagaagttgattat 59
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 atgcttataaaaagacattgctcaagctatcaagtctagtggcaagaagaagttgattat 202

                                                                       
Query: 60  agtcttggctccaatcgttcatcttgtacatcagctatacaatgatttgaagcatcatac 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 agtcttggctccaatcgttcatcttgtacatcagctatacaatgatttgaagcatcatac 262

                                                                       
Query: 120 cggttttcaagttgaggagtactatgggagaggagttgatgaatggaatttaaagacctg 179
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cggttttcaaggtgaggagtactatgggagaggagttgatgaatggaatttaaagacctg 322

                                                                       
Query: 180 ggagaaggaggtttctgaaaatgatgtgctggttatgacaccccagattctcttgaatgc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggagaaggaggtttctgaaaatgatgtgctggttatgacaccccagattctcttgaatgc 382

                                                                       
Query: 240 cttaactaaagcatttctgaaagtagaaatgataagcttgatggttatcgacgaatgtca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttaactaaagcatttctgaaagtagaaatgataagcttgatggttatcgacgaatgtca 442

                                                     
Query: 300 taatgcaactggcaaccatccctatgcaagaataatgaagga 341
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 taatgcaactggcaaccatccctatgcaagaataatgaagga 484


>gnl|LJGI|GO019063 similar to UniRef100_A7P8Q9 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 839

 Score = 85.7 bits (43), Expect = 4e-16
 Identities = 43/43 (100%)
 Strand = Plus / Minus

                                                      
Query: 858 ccaatgtgagacttctaacacaccccctcacgtccaggactga 900
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ccaatgtgagacttctaacacaccccctcacgtccaggactga 292


>gnl|LJGI|AV412624 similar to UniRef100_A4CPG1 Cluster: Na(+)-translocating
           NADH-quinone reductase subunit C; n=1; Robiginitalea
           biformata HTCC2501|Rep: Na(+)-translocating NADH-quinone
           reductase subunit C - Robiginitalea biformata HTCC2501,
           partial (5%)
          Length = 400

 Score = 75.8 bits (38), Expect = 4e-13
 Identities = 61/69 (88%), Gaps = 6/69 (8%)
 Strand = Plus / Plus

                                                                       
Query: 834 ttataaagaccatctatgctctatc------caatgtgagacttctaacacaccccctca 887
           |||||||||| ||||||||||||||      ||||||| |||||||||||||||||||||
Sbjct: 166 ttataaagactatctatgctctatctctagccaatgtgggacttctaacacaccccctca 225

                    
Query: 888 cgtccagga 896
           |||||||||
Sbjct: 226 cgtccagga 234


>gnl|LJGI|TC59069 similar to UniRef100_Q5IFH7 Cluster: Triterpene UDP-glucosyl
           transferase UGT71G1; n=1; Medicago truncatula|Rep:
           Triterpene UDP-glucosyl transferase UGT71G1 - Medicago
           truncatula (Barrel medic), partial (15%)
          Length = 811

 Score = 73.8 bits (37), Expect = 2e-12
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                        
Query: 852 ctctatccaatgtgagacttctaacacaccccctcacgtccagga 896
           ||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 666 ctctagccaatgtgggacttctaacacaccccctcacgtccagga 622


>gnl|LJGI|BP064555 homologue to UniRef100_Q2Q679 Cluster: Cytochrome c oxidase subunit
           I; n=2; Ligidium germanicum|Rep: Cytochrome c oxidase
           subunit I - Ligidium germanicum, partial (8%)
          Length = 510

 Score = 71.9 bits (36), Expect = 7e-12
 Identities = 36/36 (100%)
 Strand = Plus / Minus

                                               
Query: 861 atgtgagacttctaacacaccccctcacgtccagga 896
           ||||||||||||||||||||||||||||||||||||
Sbjct: 70  atgtgagacttctaacacaccccctcacgtccagga 35