Miyakogusa Predicted Gene
- Lj0g3v0345269.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0345269.1 CUFF.23689.1
(3996 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62300 homologue to UniRef100_A9TU97 Cluster: Predicte... 739 0.0
gnl|LJGI|FS345754 729 0.0
gnl|LJGI|FS318823 similar to UniRef100_A7QJK8 Cluster: Chromosom... 636 0.0
gnl|LJGI|FS341967 similar to UniRef100_A7QJK8 Cluster: Chromosom... 396 e-109
>gnl|LJGI|TC62300 homologue to UniRef100_A9TU97 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(13%)
Length = 707
Score = 739 bits (373), Expect = 0.0
Identities = 373/373 (100%)
Strand = Plus / Plus
Query: 3624 tgctcgaaatgcccaaatccatcaacagaagattgacagcaggggaggttttaatgtggc 3683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctcgaaatgcccaaatccatcaacagaagattgacagcaggggaggttttaatgtggc 60
Query: 3684 tacaaattctgaagatcactcggaatctaatactgtttcagatgaaacagacagtgaagt 3743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacaaattctgaagatcactcggaatctaatactgtttcagatgaaacagacagtgaagt 120
Query: 3744 aattgatggatgcgctgatgagacagatactttgtctttaaatggtaaatcacaatctaa 3803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattgatggatgcgctgatgagacagatactttgtctttaaatggtaaatcacaatctaa 180
Query: 3804 gcatgtaccggaagcatcttctggtgcttcgagtgagttgattgagccagatcaagtgga 3863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatgtaccggaagcatcttctggtgcttcgagtgagttgattgagccagatcaagtgga 240
Query: 3864 tattgaagtccaatcaccaataactaagatgagaggaactcaacggtccagagctaagaa 3923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tattgaagtccaatcaccaataactaagatgagaggaactcaacggtccagagctaagaa 300
Query: 3924 aagcaatgtgaaagatggaaagggtgatatctctgtctccaaaagaagagctattgggtc 3983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagcaatgtgaaagatggaaagggtgatatctctgtctccaaaagaagagctattgggtc 360
Query: 3984 aaggaggtagata 3996
|||||||||||||
Sbjct: 361 aaggaggtagata 373
>gnl|LJGI|FS345754
Length = 711
Score = 729 bits (368), Expect = 0.0
Identities = 368/368 (100%)
Strand = Plus / Minus
Query: 3629 gaaatgcccaaatccatcaacagaagattgacagcaggggaggttttaatgtggctacaa 3688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaaatgcccaaatccatcaacagaagattgacagcaggggaggttttaatgtggctacaa 652
Query: 3689 attctgaagatcactcggaatctaatactgtttcagatgaaacagacagtgaagtaattg 3748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 attctgaagatcactcggaatctaatactgtttcagatgaaacagacagtgaagtaattg 592
Query: 3749 atggatgcgctgatgagacagatactttgtctttaaatggtaaatcacaatctaagcatg 3808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 atggatgcgctgatgagacagatactttgtctttaaatggtaaatcacaatctaagcatg 532
Query: 3809 taccggaagcatcttctggtgcttcgagtgagttgattgagccagatcaagtggatattg 3868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 taccggaagcatcttctggtgcttcgagtgagttgattgagccagatcaagtggatattg 472
Query: 3869 aagtccaatcaccaataactaagatgagaggaactcaacggtccagagctaagaaaagca 3928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aagtccaatcaccaataactaagatgagaggaactcaacggtccagagctaagaaaagca 412
Query: 3929 atgtgaaagatggaaagggtgatatctctgtctccaaaagaagagctattgggtcaagga 3988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atgtgaaagatggaaagggtgatatctctgtctccaaaagaagagctattgggtcaagga 352
Query: 3989 ggtagata 3996
||||||||
Sbjct: 351 ggtagata 344
>gnl|LJGI|FS318823 similar to UniRef100_A7QJK8 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 321
Score = 636 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Plus
Query: 320 cttccgaaggtgaccttcccttcttgctcgatcgcctcgcctcccatcgtaatgctttca 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttccgaaggtgaccttcccttcttgctcgatcgcctcgcctcccatcgtaatgctttca 60
Query: 380 aaatttacaccttcttcctcctcagtattgttctcgctgaagattccaacaacgccaacg 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatttacaccttcttcctcctcagtattgttctcgctgaagattccaacaacgccaacg 120
Query: 440 ccaacgctgcctccaaggtggtggcagcaagtgccaggaagaaacagcctgcaaaatcat 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaacgctgcctccaaggtggtggcagcaagtgccaggaagaaacagcctgcaaaatcat 180
Query: 500 ggaattgggagccacagagagctcggattctcaatcttattgccaactcattggagatta 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggaattgggagccacagagagctcggattctcaatcttattgccaactcattggagatta 240
Query: 560 accttgaattacttttcggctcacctgaccttgacgaaggttacttatctttcatcacaa 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accttgaattacttttcggctcacctgaccttgacgaaggttacttatctttcatcacaa 300
Query: 620 aaaacacattctccatgtttg 640
|||||||||||||||||||||
Sbjct: 301 aaaacacattctccatgtttg 321
>gnl|LJGI|FS341967 similar to UniRef100_A7QJK8 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 315
Score = 396 bits (200), Expect = e-109
Identities = 200/200 (100%)
Strand = Plus / Plus
Query: 1 atggctcctcacttcgtgttccctcgcacccttcaagacctcgaagaagaatcacccgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19 atggctcctcacttcgtgttccctcgcacccttcaagacctcgaagaagaatcacccgaa 78
Query: 61 gacaaccgtctctgcgtccaaaaccctatcgacctcgcttcccttcgctcctcccaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 gacaaccgtctctgcgtccaaaaccctatcgacctcgcttcccttcgctcctcccaactc 138
Query: 121 gaagagttcgtcaaaggcgtctccttcgatctctccgacaaagaactcctctgcgtcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 gaagagttcgtcaaaggcgtctccttcgatctctccgacaaagaactcctctgcgtcgag 198
Query: 181 gaccacgacgtcttcgatcg 200
||||||||||||||||||||
Sbjct: 199 gaccacgacgtcttcgatcg 218
Score = 71.9 bits (36), Expect = 3e-11
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 262 gagagcctccgttccaatctcgccgtgcttctccct 297
||||||||||||||||||||||||||||||||||||
Sbjct: 280 gagagcctccgttccaatctcgccgtgcttctccct 315