Miyakogusa Predicted Gene
- Lj0g3v0344869.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0344869.1 Non Chatacterized Hit- tr|I1H4E9|I1H4E9_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,42.86,1e-18,seg,NULL; MFS general substrate transporter,Major
facilitator superfamily domain, general substrate ,CUFF.23660.1
(1131 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS335219 similar to UniRef100_Q6BDD4 Cluster: Hexose tr... 700 0.0
gnl|LJGI|TC72367 similar to UniRef100_A7NUZ2 Cluster: Chromosome... 186 2e-46
gnl|LJGI|BP067591 weakly similar to UniRef100_Q5K3W0 Cluster: Mo... 70 3e-11
gnl|LJGI|DC594650 similar to UniRef100_A7NUZ2 Cluster: Chromosom... 58 1e-07
>gnl|LJGI|FS335219 similar to UniRef100_Q6BDD4 Cluster: Hexose transporter HT2; n=1;
Vitis vinifera|Rep: Hexose transporter HT2 - Vitis
vinifera (Grape), partial (33%)
Length = 531
Score = 700 bits (353), Expect = 0.0
Identities = 473/513 (92%)
Strand = Plus / Plus
Query: 1 atggctgttgggggattcaccgctgattcttcagccaatgatggcggcttcagcggcaaa 60
|||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |||
Sbjct: 12 atggctgttgggggattcgccgctgattcttcagccaatggcggcggcttcaacggaaaa 71
Query: 61 attacaatctcagttgtcatcacttgcattgttgctgcctccggtggactcattttcggt 120
|| |||||||||||||||||||||||||| |||||||| |||||||||||||| || ||
Sbjct: 72 ataacaatctcagttgtcatcacttgcatcgttgctgcttccggtggactcatctttgga 131
Query: 121 tatgacatcggaatttcaggaggtgtcactacgatgaaaccatttctcgaaaaattcttc 180
|||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 132 tatgacttaggaatttcaggaggtgtcactacgatgaaaccatttcttgaaaaattcttc 191
Query: 181 ctagatgtgttgaaaaaggctgcaagcgccgaaacaaacatgtattgtgtgtatgatagc 240
| |||||||||| ||||| |||||||| |||||| |||||||| |||||||||||||||
Sbjct: 192 cctgatgtgttgagaaaggttgcaagcgtcgaaacgaacatgtactgtgtgtatgatagc 251
Query: 241 gagatcttgacattattcacatcctccctttatttagcggggctagtgtctactctccta 300
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 252 gagatcttgacattattcacatcctccctttatctagcagggctagtgtctactctccta 311
Query: 301 gccagccgagtcaccacaacgttgggtcggagaaacaccatgatcttgggtggttgcatc 360
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gccagccgagtcaccacgacattgggtcggagaaacaccatgatcttgggtggttgcatc 371
Query: 361 ttttttgctggtggtgctatcaatggtgctgctgaaaacaaggtcatgctcatcttgggt 420
|||||||||||||||||||| || ||||||||||||||||| | |||||||||||| |||
Sbjct: 372 ttttttgctggtggtgctattaacggtgctgctgaaaacaaagccatgctcatcttaggt 431
Query: 421 cgtattttgctgggtcttggggtcggtttcactaatcaagcaacgccattgtacctatcg 480
|||||||| ||||| ||||| ||||||||||||||||||| || ||||||||||||||
Sbjct: 432 cgtattttattgggttttgggctcggtttcactaatcaagctaccccattgtacctatca 491
Query: 481 gaaattgctccaccaaaatggcgaggcgcgttc 513
||||| |||||||| ||||||||||| ||||||
Sbjct: 492 gaaatcgctccacccaaatggcgaggtgcgttc 524
>gnl|LJGI|TC72367 similar to UniRef100_A7NUZ2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 490
Score = 186 bits (94), Expect = 2e-46
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 460 gcaacgccattgtacctatcggaaattgctccaccaaaatggcgaggcgcgttcaacacc 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 gcaacgccattgtacctatcggaaattgctccaccaaaatggcgaggcgcgttcaacacc 72
Query: 520 ggcttccaattcttcgtcggaaccggcgtagtgg 553
||||||||||||||||||||||||||||||||||
Sbjct: 73 ggcttccaattcttcgtcggaaccggcgtagtgg 106
>gnl|LJGI|BP067591 weakly similar to UniRef100_Q5K3W0 Cluster: Monosaccharide
transporter; n=1; Populus tremula x Populus
tremuloides|Rep: Monosaccharide transporter - Populus
tremula x Populus tremuloides, partial (21%)
Length = 358
Score = 69.9 bits (35), Expect = 3e-11
Identities = 86/103 (83%)
Strand = Plus / Plus
Query: 79 atcacttgcattgttgctgcctccggtggactcattttcggttatgacatcggaatttca 138
||||||||||| |||||||| || |||||||| ||||| || ||||| | |||||| ||
Sbjct: 41 atcacttgcatcgttgctgcatctggtggacttatttttggatatgatgttggaattgca 100
Query: 139 ggaggtgtcactacgatgaaaccatttctcgaaaaattcttcc 181
|||||||| || |||||| || ||||| |||||||||||||
Sbjct: 101 ggaggtgtaacaacgatgttgccgtttcttgaaaaattcttcc 143
>gnl|LJGI|DC594650 similar to UniRef100_A7NUZ2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 480
Score = 58.0 bits (29), Expect = 1e-07
Identities = 68/81 (83%)
Strand = Plus / Minus
Query: 1015 ttcttacctgagaccaaagggattcctttggattcaatgcacacgatatggggcgaccac 1074
|||||||||||||||||||| |||| ||||| || ||| |||| |||||||| | |||
Sbjct: 298 ttcttacctgagaccaaaggagttccattggagtccatgtacactatatggggaaaacac 239
Query: 1075 tggtattggcgccagtttgtt 1095
|||| |||||| | |||||||
Sbjct: 238 tggttttggcgtcggtttgtt 218