Miyakogusa Predicted Gene

Lj0g3v0344829.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0344829.2 Non Chatacterized Hit- tr|Q2JJW5|Q2JJW5_SYNJB
Putative uncharacterized protein OS=Synechococcus sp.
,35.29,2e-18,seg,NULL; DUF3531,Protein of unknown function
DUF3531,CUFF.23661.2
         (978 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW597253 similar to UniRef100_A7PEC4 Cluster: Chromosom...   934   0.0  

>gnl|LJGI|BW597253 similar to UniRef100_A7PEC4 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (51%)
          Length = 471

 Score =  934 bits (471), Expect = 0.0
 Identities = 471/471 (100%)
 Strand = Plus / Plus

                                                                       
Query: 347 gtcgaggagcatatacaggtagggaagagaaggattacgatagagatccagaatttgctc 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtcgaggagcatatacaggtagggaagagaaggattacgatagagatccagaatttgctc 60

                                                                       
Query: 407 aaattcttggaaattttgtagatgatcccaaaacggcacaggccagaatggaagagagac 466
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaattcttggaaattttgtagatgatcccaaaacggcacaggccagaatggaagagagac 120

                                                                       
Query: 467 tgagaaagaagaggaataaaatactgcagacaaagactggatcaggagtaccaatgaaag 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagaaagaagaggaataaaatactgcagacaaagactggatcaggagtaccaatgaaag 180

                                                                       
Query: 527 ttttagttaacaaatttgatttttcaaactcatatatatggtttgaattttacaatgctc 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttttagttaacaaatttgatttttcaaactcatatatatggtttgaattttacaatgctc 240

                                                                       
Query: 587 cattggcaaaagacatctccttaatttgtgatactattcgagcatggcacatcatgggac 646
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cattggcaaaagacatctccttaatttgtgatactattcgagcatggcacatcatgggac 300

                                                                       
Query: 647 gtcttggtggatgcaattccatgaatatgcaactgtcacagtctccaatggataaacgac 706
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcttggtggatgcaattccatgaatatgcaactgtcacagtctccaatggataaacgac 360

                                                                       
Query: 707 caagttatgattatattcagggagcaaatgtgaccccaactacattttacaacattgggg 766
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caagttatgattatattcagggagcaaatgtgaccccaactacattttacaacattgggg 420

                                                              
Query: 767 atcttgaggttcaagacaaccttgctcgaatatgggtggatattggaactg 817
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcttgaggttcaagacaaccttgctcgaatatgggtggatattggaactg 471