Miyakogusa Predicted Gene

Lj0g3v0344789.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0344789.1 tr|Q5RJC3|Q5RJC3_ARATH At5g59830 OS=Arabidopsis
thaliana PE=2 SV=1,32.72,4e-18, ,CUFF.23657.1
         (1683 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77762 similar to UniRef100_A7NZ62 Cluster: Chromosome...   952   0.0  

>gnl|LJGI|TC77762 similar to UniRef100_A7NZ62 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 706

 Score =  952 bits (480), Expect = 0.0
 Identities = 486/488 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcttttcagcataaaagcttttggatgccgcgggatgctggctgcttggctgaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atgtcttttcagcataaaagcttttggatgccgcgggatgctggctgcttggctgaagaa 272

                                                                       
Query: 61  aatgttggatatgagaactcttccagaattgaaccaaagcggagtcatcagtggtttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aatgttggatatgagaactcttccagaattgaaccaaagcggagtcatcagtggtttatg 332

                                                                       
Query: 121 gatacaggcgaatcagaagtattcagcaacaaaaaacaagcagttgaagctgttagtgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gatacaggcgaatcagaagtattcagcaacaaaaaacaagcagttgaagctgttagtgac 392

                                                                       
Query: 181 aggccagtatcaggagtttcacatgtgaatgtttctcaatgggacaccaattcagggttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 393 aggccagtatcaggagtttcacatgtgaatgtttctcaatgggacaccaattcagggtta 452

                                                                       
Query: 241 cattcagtcacaggtcaattttctgatcgtctctttggatctgatgtacggaatgtcaat 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cattaagtcacaggtcaattttctgatcgtctctttggatctgatgtacggaatgtcaat 512

                                                                       
Query: 301 ttggttgataaaaacatgccatcaattggaagtggaaatctgaacatgggaaggaaagat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ttggttgataaaaacatgccatcaattggaagtggaaatctgaacatgggaaggaaagat 572

                                                                       
Query: 361 tttgggaatcaatatggtaatgatccatctatgggattgtcaattaccattccagaccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tttgggaatcaatatggtaatgatccatctatgggattgtcaattaccattccagaccct 632

                                                                       
Query: 421 tcatcatgtctgaattttggtggcatcagaaaagttaaagttaatcaagttagagattct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tcatcatgtctgaattttggtggcatcagaaaagttaaagttaatcaagttagagattct 692

                   
Query: 481 gataattg 488
           ||||||||
Sbjct: 693 gataattg 700