Miyakogusa Predicted Gene

Lj0g3v0344549.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0344549.1 Non Chatacterized Hit- tr|I1KC54|I1KC54_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.76,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; AMP_BINDING,AMP-binding, conserved
site; seg,NULL; ,CUFF.23641.1
         (1006 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC598740 weakly similar to UniRef100_A7PHD6 Cluster: Ch...   660   0.0  

>gnl|LJGI|DC598740 weakly similar to UniRef100_A7PHD6 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (19%)
          Length = 547

 Score =  660 bits (333), Expect = 0.0
 Identities = 333/333 (100%)
 Strand = Plus / Plus

                                                                       
Query: 137 caaccgccacctccaccgccgcactcatagactccgaaaccgactgccacctctcgtatt 196
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 caaccgccacctccaccgccgcactcatagactccgaaaccgactgccacctctcgtatt 274

                                                                       
Query: 197 ccgtcctcctccgccagataaaatccctcgcttcctccctccaatccctcacccctctct 256
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ccgtcctcctccgccagataaaatccctcgcttcctccctccaatccctcacccctctct 334

                                                                       
Query: 257 ccaagggacacgtggcactcatcctcaccccaacttccctacacgtccccgtactctatc 316
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ccaagggacacgtggcactcatcctcaccccaacttccctacacgtccccgtactctatc 394

                                                                       
Query: 317 tctcactcctctccctcggtgtcacaatctcacccgctaacccgatcggttccccctccg 376
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tctcactcctctccctcggtgtcacaatctcacccgctaacccgatcggttccccctccg 454

                                                                       
Query: 377 aggtgactcaccaggttcaactcaccaaacccgccatcgccttcgctacctccgccaccg 436
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aggtgactcaccaggttcaactcaccaaacccgccatcgccttcgctacctccgccaccg 514

                                            
Query: 437 ccgccaaaatccccgcccatgaaatcccgttcg 469
           |||||||||||||||||||||||||||||||||
Sbjct: 515 ccgccaaaatccccgcccatgaaatcccgttcg 547



 Score =  133 bits (67), Expect = 2e-30
 Identities = 67/67 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccatcgatccaaacagcggcttctgctctcaatccagaaccttccacagcctccgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  atggccatcgatccaaacagcggcttctgctctcaatccagaaccttccacagcctccgt 138

                  
Query: 61  ccaaacg 67
           |||||||
Sbjct: 139 ccaaacg 145