Miyakogusa Predicted Gene

Lj0g3v0344429.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0344429.1 tr|Q5ULY0|Q5ULY0_FRAAN Basic helix-loop-helix
protein (Fragment) OS=Fragaria ananassa PE=2
SV=1,46.94,0.000005,seg,NULL,CUFF.23650.1
         (307 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77685 similar to UniRef100_Q5ULY0 Cluster: Basic heli...   299   5e-81
gnl|LJGI|TC68549 similar to UniRef100_Q9FUA4 Cluster: Transcript...   250   4e-66

>gnl|LJGI|TC77685 similar to UniRef100_Q5ULY0 Cluster: Basic helix-loop-helix
           protein; n=1; Fragaria x ananassa|Rep: Basic
           helix-loop-helix protein - Fragaria ananassa
           (Strawberry), partial (45%)
          Length = 688

 Score =  299 bits (151), Expect = 5e-81
 Identities = 230/256 (89%), Gaps = 9/256 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccgaggaagatagctacaacctctcttcttc---ctcacaagacgaaatctccctt 57
           ||||| |||||||||||||||||||||||||||||   |||||| |||||||||||||||
Sbjct: 119 atggcagaggaagatagctacaacctctcttcttcttcctcacaggacgaaatctccctt 178

                                                                       
Query: 58  ttcctccgtcagattcttctctgttcatcctcttcttccaaccccaatatgcctccatcc 117
           ||||||||||||||||||||| ||||||| ||      ||||||||| ||||||||||||
Sbjct: 179 ttcctccgtcagattcttctccgttcatcatc------caaccccaacatgcctccatcc 232

                                                                       
Query: 118 tccaactcaccccttcattccaccgccggagcctttctctccgctccgcctcacccactg 177
           |||||||||||||||||| ||||||||||||||| |||||||||| |  |||| || |||
Sbjct: 233 tccaactcaccccttcataccaccgccggagcctatctctccgcttcatctcagcctctg 292

                                                                       
Query: 178 cttgctgcaaatgtgtcctcctcctctctaggtatcagtgagaacgaggctgatgaatat 237
           | |||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 293 cctgctgcaaatgtctcttcctcctctctaggtgtcagtgagaatgaggctgatgaatat 352

                           
Query: 238 gactgtgaaagtgagg 253
           ||||||||||||||||
Sbjct: 353 gactgtgaaagtgagg 368


>gnl|LJGI|TC68549 similar to UniRef100_Q9FUA4 Cluster: Transcription factor SPATULA;
           n=2; Arabidopsis thaliana|Rep: Transcription factor
           SPATULA - Arabidopsis thaliana (Mouse-ear cress),
           partial (18%)
          Length = 840

 Score =  250 bits (126), Expect = 4e-66
 Identities = 151/159 (94%), Gaps = 4/159 (2%)
 Strand = Plus / Plus

                                                                       
Query: 97  aaccccaatatgcctccatcctccaactcaccccttcattccaccgccggagcctttctc 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaccccaatatgcctccatcctccaactcaccccttcattccaccgccggagcctttctc 371

                                                                       
Query: 157 tccgctccgcctcacccactgcttgctgcaaatgtgtcctcctcctctctaggtatcagt 216
           |||    |||||||||| |||| | |||||||||||||||||||||||||||||||||||
Sbjct: 372 tcc----cgcctcaccctctgcctactgcaaatgtgtcctcctcctctctaggtatcagt 427

                                                  
Query: 217 gagaacgaggctgatgaatatgactgtgaaagtgaggta 255
           ||||||||||||| |||||||||||||||||||||||||
Sbjct: 428 gagaacgaggctggtgaatatgactgtgaaagtgaggta 466