Miyakogusa Predicted Gene

Lj0g3v0344289.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0344289.1 tr|K1X928|K1X928_MARBU DEAD/DEAH box helicase
OS=Marssonina brunnea f. sp. multigermtubi (strain MB_,66.67,3.8,
,CUFF.23618.1
         (232 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP061395                                                     381   e-105
gnl|LJGI|TC79759                                                       88   3e-17

>gnl|LJGI|BP061395 
          Length = 326

 Score =  381 bits (192), Expect = e-105
 Identities = 224/232 (96%), Gaps = 2/232 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaagaagatgttgaagaggaattcaatataccctgtagtatttatagatgtagctcct 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 302 atgaagaagatgttgaagaggaattccatataccctgtagtatttatagatgtagctcct 243

                                                                       
Query: 61  gtgaagaacaaatataccttgtacgtatttattttaaaaacattgaaaacttacattctc 120
           ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 242 gtgaagaaccaatataccttgtacgtatttattttaaaaacattg-aaacttacattctc 184

                                                                       
Query: 121 tcctcctgcaacctttttcttctttttcatttaccattaaaaaccaacagggttttattc 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||
Sbjct: 183 tcctcctgcaacctttttcttctttttcatttaccattaaaaacc-acccggttttattc 125

                                                               
Query: 181 catgtgatgaaggtccaccttaagttaaatatgttctgtcaattgtggtagt 232
           |||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 124 catgtgatgaaggtcccccttaagttaaatatgttctgtccattgtggtagt 73


>gnl|LJGI|TC79759 
          Length = 881

 Score = 87.7 bits (44), Expect = 3e-17
 Identities = 44/44 (100%)
 Strand = Plus / Plus

                                                       
Query: 189 gaaggtccaccttaagttaaatatgttctgtcaattgtggtagt 232
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gaaggtccaccttaagttaaatatgttctgtcaattgtggtagt 45