Miyakogusa Predicted Gene
- Lj0g3v0344009.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0344009.1 Non Chatacterized Hit- tr|I1R0T8|I1R0T8_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,31.67,2e-18,coiled-coil,NULL; DUF247,Protein of unknown function
DUF247, plant; seg,NULL; FAMILY NOT NAMED,NULL,CUFF.23597.1
(1705 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60874 weakly similar to UniRef100_A7QAK6 Cluster: Chr... 1400 0.0
gnl|LJGI|FS360304 weakly similar to UniRef100_A7PIW0 Cluster: Ch... 1263 0.0
>gnl|LJGI|TC60874 weakly similar to UniRef100_A7QAK6 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 779
Score = 1400 bits (706), Expect = 0.0
Identities = 709/710 (99%)
Strand = Plus / Plus
Query: 1 atgtcttcttctctaagagccaccatgtcatataattctaaatcaagctttggtgagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atgtcttcttctctaagagccaccatgtcatataattctaaatcaagctttggtgagcaa 129
Query: 61 ctatgggtgattcatatccggaaaaccctcgaagaagaactcgaggacgatggacaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ctatgggtgattcatatccggaaaaccctcgaagaagaactcgaggacgatggacaatat 189
Query: 121 actgtgtccatcttcaacgtgccgaagcttcttatggcaagtgatccagattcttatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 actgtgtccatcttcaacgtgccgaagcttcttatggcaagtgatccagattcttatgtc 249
Query: 181 ccgcaacaaattgcaatcggtccgtaccactattggcgtccggagtggtatgagatgcaa 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 250 ccgcaacaaattgcaatcggtccgtaccactattggcgtccggagttgtatgagatgcaa 309
Query: 241 aggtacaagcttgcagcagctaaaaggttccagaaacagctacaaggccacaagttagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aggtacaagcttgcagcagctaaaaggttccagaaacagctacaaggccacaagttagac 369
Query: 301 aaccttgtttgccaattggaaaacttggagcagaggatccgaggatgctaccacaagttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaccttgtttgccaattggaaaacttggagcagaggatccgaggatgctaccacaagttc 429
Query: 361 ttggatttcaactgcgaaacattggtgtggatgatggcggttgacgccttgttcttactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttggatttcaactgcgaaacattggtgtggatgatggcggttgacgccttgttcttactt 489
Query: 421 gagttccttcaagtcttcgccatacaagaaggtgcaaaggtccctttggtttcctctagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gagttccttcaagtcttcgccatacaagaaggtgcaaaggtccctttggtttcctctagc 549
Query: 481 atgtctcatttggtggactatgctggcaagaaatcagctcacaatgcaatattgagagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atgtctcatttggtggactatgctggcaagaaatcagctcacaatgcaatattgagagat 609
Query: 541 tttgtgatgcttgagaatcaaatccctttgtttgttctgagaaagatgctggagttgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tttgtgatgcttgagaatcaaatccctttgtttgttctgagaaagatgctggagttgaaa 669
Query: 601 ttctcatcactggaaactgcagatgagactcttctcttgatgctcatagggctgtttaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttctcatcactggaaactgcagatgagactcttctcttgatgctcatagggctgtttaaa 729
Query: 661 gagatttctcctttcaagatgattgaggagtttccaaacattaatgtctc 710
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gagatttctcctttcaagatgattgaggagtttccaaacattaatgtctc 779
>gnl|LJGI|FS360304 weakly similar to UniRef100_A7PIW0 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (42%)
Length = 773
Score = 1263 bits (637), Expect = 0.0
Identities = 658/665 (98%)
Strand = Plus / Minus
Query: 1041 agaaaaaggtgatgatggcaaaccagaagatgagaattcaggctcgaaaagtctaatgaa 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 agaaaaaggtgatgatggcaaaccagaagatgagaattcaggctcgaaaagtctaatgaa 714
Query: 1101 caagccgccctcgatggaggaaatcgcgataccatctgtcacagagctcttgaattccgg 1160
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 713 caagccgccctcgatggaggaaatcacgattccatctgtcacagagctcttgaattccgg 654
Query: 1161 ggttcgtttcttgcccgtcaagggaagcatatcgcaaatcagcttcgatgtgaaaacatg 1220
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 653 ggttcgtttcttgcccgtcaagggaagcatatcacaaatcagcttcgatgtgaaaacatg 594
Query: 1221 ctcgttttatcttcccatggtctgtttggacgtgaacacggaacctttcctgagaaacat 1280
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 593 ctcgttttaccttcccatggtctgtttggacgtgaacacagaacctttcctgagaaacat 534
Query: 1281 ggttgcatatgaagctgcggttcggtctgggccattggtaattacccgttacaccgaaat 1340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggttgcatatgaagctgcggttcggtctgggccattggtaattacccgttacaccgaaat 474
Query: 1341 gatgaacaggatcgtagactcagaggaggatgcgaagattctgagaaagaaagggattat 1400
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 473 gatgaacgggatcgtagactcagaggaggatgcgaagattctgagagagaaagggattat 414
Query: 1401 tctgagccacttgaagagtgataaagaggtggctaacttgtggaatgggatgagcaagtc 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tctgagccacttgaagagtgataaagaggtggctaacttgtggaatgggatgagcaagtc 354
Query: 1461 gttgagattgtctaaggttccattcttagataaggtgattgaggatgtgaacaagtatca 1520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gttgagattgtctaaggttccattcttagataaggtgattgaggatgtgaacaagtatca 294
Query: 1521 taacagcagattgaaggttaagatttggagattcatgaaggtttatgtgtttagttcttg 1580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 taacagcagattgaaggttaagatttggagattcatgaaggtttatgtgtttagttcttg 234
Query: 1581 gcagtttttgacatttatagctgctatcttcctcttgcttttgacagccatgcaatcctt 1640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gcagtttttgacatttatagctgctatcttcctcttgcttttgacagccatgcaatcctt 174
Query: 1641 ctgctctgtctatacctgcaatcgcttcttcaactctgcgctacagcaaaagccaagtaa 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ctgctctgtctatacctgcaatcgcttcttcaactctgcgctacagcaaaagccaagtaa 114
Query: 1701 ttgat 1705
|||||
Sbjct: 113 ttgat 109