Miyakogusa Predicted Gene
- Lj0g3v0343839.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0343839.1 Non Chatacterized Hit- tr|I1LYP3|I1LYP3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.38,0,seg,NULL;
AUX_IAA,AUX/IAA protein; CAD & PB1 domains,NULL; FAMILY NOT
NAMED,NULL; IAA_ARF,Aux/IAA-AR,CUFF.23587.1
(831 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60778 similar to UniRef100_A7Q1K7 Cluster: Chromosome... 1647 0.0
gnl|LJGI|BW599222 452 e-126
gnl|LJGI|BW600269 similar to UniRef100_Q8RW17 Cluster: Aux/IAA p... 363 1e-99
gnl|LJGI|BW598992 weakly similar to UniRef100_Q8RW17 Cluster: Au... 351 4e-96
gnl|LJGI|TC71906 weakly similar to UniRef100_A7NXJ0 Cluster: Chr... 216 2e-55
gnl|LJGI|TC67224 similar to UniRef100_Q8RW17 Cluster: Aux/IAA pr... 84 2e-15
gnl|LJGI|TC79115 similar to UniRef100_A7P779 Cluster: Chromosome... 80 2e-14
gnl|LJGI|BP046576 similar to UniRef100_Q7XYT5 Cluster: Auxin-ind... 74 2e-12
gnl|LJGI|TC70802 similar to UniRef100_A7PEL3 Cluster: Chromosome... 70 2e-11
gnl|LJGI|TC77347 similar to UniRef100_O24543 Cluster: Auxin-indu... 54 1e-06
gnl|LJGI|TC69855 similar to UniRef100_P32294 Cluster: Auxin-indu... 54 1e-06
gnl|LJGI|TC60581 similar to UniRef100_O24543 Cluster: Auxin-indu... 54 1e-06
>gnl|LJGI|TC60778 similar to UniRef100_A7Q1K7 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (49%)
Length = 1514
Score = 1647 bits (831), Expect = 0.0
Identities = 831/831 (100%)
Strand = Plus / Plus
Query: 1 atgtcaacggcgtctaaagatgataacttggccctttcttctgaggattcttcatcccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atgtcaacggcgtctaaagatgataacttggccctttcttctgaggattcttcatcccca 329
Query: 61 gatgagtctgagcttgatttgggtcttgggttaagcctttctcaccatgcaaagtctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gatgagtctgagcttgatttgggtcttgggttaagcctttctcaccatgcaaagtctcat 389
Query: 121 catcaacatgccccttatgctagaattttcacagctaaggatttttcttcttcagcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 catcaacatgccccttatgctagaattttcacagctaaggatttttcttcttcagcacca 449
Query: 181 tcaccctcctcctccaacgttgctgctgggaccaagagagctgctgaatctcttgttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tcaccctcctcctccaacgttgctgctgggaccaagagagctgctgaatctcttgttgct 509
Query: 241 actaaccggcccagtcaagtagttggatggcctccccttccagcatgtagaatgaacagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 actaaccggcccagtcaagtagttggatggcctccccttccagcatgtagaatgaacagc 569
Query: 301 tttaatagccaggccaaatcaactgaagtatttgaccctgttgctgagaagagtaagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tttaatagccaggccaaatcaactgaagtatttgaccctgttgctgagaagagtaagagc 629
Query: 361 aacaatactgtggtaaggaagggtgctgaaaatggcaatgataatagcgtaatcaatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aacaatactgtggtaaggaagggtgctgaaaatggcaatgataatagcgtaatcaatatc 689
Query: 421 aaagacaaaagacacatcaggagttccccgttcatcaaggtaaacatggacggtacacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aaagacaaaagacacatcaggagttccccgttcatcaaggtaaacatggacggtacacca 749
Query: 481 attggaaggaaagttgatttgagcgcccatagttcctatgaaaccttagcagaaacattg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 attggaaggaaagttgatttgagcgcccatagttcctatgaaaccttagcagaaacattg 809
Query: 541 gaagatatgtttaatgaatcaactgcatccatcacttgcaaaggttcaaatggggatgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaagatatgtttaatgaatcaactgcatccatcacttgcaaaggttcaaatggggatgat 869
Query: 601 cgtggcattatttttggaggagaaaggcattcaaagttgttggatggatcttccaagttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 cgtggcattatttttggaggagaaaggcattcaaagttgttggatggatcttccaagttt 929
Query: 661 gtgctcacttatgaagacaaggaaggagattggatgctggtcggggatgttccttggggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 gtgctcacttatgaagacaaggaaggagattggatgctggtcggggatgttccttggggg 989
Query: 721 atgttcaccggttcagtgaggagactacggatcatgagaacatctgaggctaatggactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 atgttcaccggttcagtgaggagactacggatcatgagaacatctgaggctaatggactt 1049
Query: 781 gccccaagattggaagaaaagaacagcagacagaaaagcaagcccatatag 831
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 gccccaagattggaagaaaagaacagcagacagaaaagcaagcccatatag 1100
>gnl|LJGI|BW599222
Length = 481
Score = 452 bits (228), Expect = e-126
Identities = 278/292 (95%), Gaps = 2/292 (0%)
Strand = Plus / Plus
Query: 36 ttcttctgaggattcttcatccccagatgagtct-gagcttgatttgggtcttgggttaa 94
||||||||| ||||||| ||||||| |||||||| || |||||||||||||||||||| |
Sbjct: 190 ttcttctgacgattcttaatccccacatgagtctagatcttgatttgggtcttgggttta 249
Query: 95 gcctttctcaccatgcaaagtctcatcatcaacatgcccc-ttatgctagaattttcaca 153
||||||| ||||||||||||||||||||||||| ||| || |||||||||||||||||||
Sbjct: 250 gcctttcacaccatgcaaagtctcatcatcaacgtgcgccattatgctagaattttcaca 309
Query: 154 gctaaggatttttcttcttcagcaccatcaccctcctcctccaacgttgctgctgggacc 213
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gctaaggatttttcttcttcatcaccatcaccctcctcctccaacgttgctgctgggacc 369
Query: 214 aagagagctgctgaatctcttgttgctactaaccggcccagtcaagtagttggatggcct 273
|| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 370 aacaaagctgctgaatctcttgttgctactaaccggcccagtcaagtatttggatggcct 429
Query: 274 ccccttccagcatgtagaatgaacagctttaatagccaggccaaatcaactg 325
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccccttccagcatgtagaatgaacagctttaatagccaggccaaatcaactg 481
>gnl|LJGI|BW600269 similar to UniRef100_Q8RW17 Cluster: Aux/IAA protein; n=1; Populus
tremula x Populus tremuloides|Rep: Aux/IAA protein -
Populus tremula x Populus tremuloides, partial (9%)
Length = 262
Score = 363 bits (183), Expect = 1e-99
Identities = 190/191 (99%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 10 gcgtctaaagatgataacttggccctttcttctgaggattcttcatccccagatgagtct 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gcgtctaaagatgataacttggccctttcttctgaggattcttcatccccagatgagtct 122
Query: 70 gagcttgatttgggtcttgggttaagcctttctcaccatgcaaagtctcatcatcaacat 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gagcttgatttgggtcttgggttaagcctttctcaccatgcaaagtctcatcatcaacat 182
Query: 130 g-ccccttatgctagaattttcacagctaaggatttttcttcttcagcaccatcaccctc 188
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcccccttatgctagaattttcacagctaaggatttttcttcttcagcaccatcaccctc 242
Query: 189 ctcctccaacg 199
|||||||||||
Sbjct: 243 ctcctccaacg 253
>gnl|LJGI|BW598992 weakly similar to UniRef100_Q8RW17 Cluster: Aux/IAA protein; n=1;
Populus tremula x Populus tremuloides|Rep: Aux/IAA
protein - Populus tremula x Populus tremuloides, partial
(11%)
Length = 467
Score = 351 bits (177), Expect = 4e-96
Identities = 243/265 (91%)
Strand = Plus / Plus
Query: 17 aagatgataacttggccctttcttctgaggattcttcatccccagatgagtctgagcttg 76
||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 199 aagatgataacttggacctttcttctgaggattcttcctccccagatgactctgagcttg 258
Query: 77 atttgggtcttgggttaagcctttctcaccatgcaaagtctcatcatcaacatgcccctt 136
||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
Sbjct: 259 atttgagtcttgggttaagcctttctcaccacgcaaagtctcatcatctacatgccccat 318
Query: 137 atgctagaattttcacagctaaggatttttcttcttcagcaccatcaccctcctcctcca 196
|||||| ||||||||| ||||| || ||||||||||||||||| || ||||||||||||
Sbjct: 319 atgctaaaattttcaccgctaatgaattttcttcttcagcaccgtcgacctcctcctcca 378
Query: 197 acgttgctgctgggaccaagagagctgctgaatctcttgttgctactaaccggcccagtc 256
| |||||||||||||||| | |||||||||||||||||| ||||| || ||||||||||
Sbjct: 379 agcttgctgctgggaccaaaaaagctgctgaatctcttgtagctacgaaacggcccagtc 438
Query: 257 aagtagttggatggcctccccttcc 281
||||| |||||||||||||||||||
Sbjct: 439 aagtatttggatggcctccccttcc 463
>gnl|LJGI|TC71906 weakly similar to UniRef100_A7NXJ0 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 528
Score = 216 bits (109), Expect = 2e-55
Identities = 112/113 (99%)
Strand = Plus / Plus
Query: 719 ggatgttcaccggttcagtgaggagactacggatcatgagaacatctgaggctaatggac 778
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 103 ggatgttcaccggttcagtgaggagactacggatcatgagaacatctgaggttaatggac 162
Query: 779 ttgccccaagattggaagaaaagaacagcagacagaaaagcaagcccatatag 831
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ttgccccaagattggaagaaaagaacagcagacagaaaagcaagcccatatag 215
Score = 188 bits (95), Expect = 4e-47
Identities = 98/99 (98%)
Strand = Plus / Plus
Query: 525 cttagcagaaacattggaagatatgtttaatgaatcaactgcatccatcacttgcaaagg 584
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2 cttagcagaaacattggaagatatgtttaatgaatcaactgcacccatcacttgcaaagg 61
Query: 585 ttcaaatggggatgatcgtggcattatttttggaggaga 623
|||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttcaaatggggatgatcgtggcattatttttggaggaga 100
>gnl|LJGI|TC67224 similar to UniRef100_Q8RW17 Cluster: Aux/IAA protein; n=1; Populus
tremula x Populus tremuloides|Rep: Aux/IAA protein -
Populus tremula x Populus tremuloides, partial (41%)
Length = 960
Score = 83.8 bits (42), Expect = 2e-15
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 477 accaattggaaggaaagttgatttgagcgcccatagttcctatgaaaccttagcagaaac 536
||||||||||||||| |||||||| || || |||||||| |||||||||||||| |||
Sbjct: 638 accaattggaaggaaggttgatttaagtgctcatagttcttatgaaaccttagctcaaag 697
Query: 537 attggaagatatgtttaatgaa 558
||||| |||||||||||||||
Sbjct: 698 cttggaggatatgtttaatgaa 719
Score = 69.9 bits (35), Expect = 2e-11
Identities = 69/81 (85%), Gaps = 7/81 (8%)
Strand = Plus / Plus
Query: 751 atcatgagaacatctgaggctaatggacttgccccaagattggaagaaaagaacagcaga 810
|||||||| |||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 776 atcatgaggacatctgaggctaatggacttg-------attggaagaacagaacagcaga 828
Query: 811 cagaaaagcaagcccatatag 831
||||||||||| |||||||
Sbjct: 829 ttgaaaagcaagctcatatag 849
Score = 60.0 bits (30), Expect = 2e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 19 gatgataacttggccctttcttctgaggattcttcatccccagatgagtctgag 72
||||| ||| ||| |||||| || |||||||||||||||||||||||| |||||
Sbjct: 231 gatgaaaacatggtcctttcctcagaggattcttcatccccagatgagactgag 284
Score = 60.0 bits (30), Expect = 2e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 251 ccagtcaagtagttggatggcctccccttccagcatgtagaatgaacagctttaatagcc 310
|||||||||||||||||||||| || || ||||| ||| |||||||||| ||||||||
Sbjct: 400 ccagtcaagtagttggatggccccctctcagagcatataggatgaacagctataatagcc 459
Query: 311 aggccaaatc 320
| || |||||
Sbjct: 460 atgcaaaatc 469
>gnl|LJGI|TC79115 similar to UniRef100_A7P779 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 732
Score = 79.8 bits (40), Expect = 2e-14
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 670 tatgaagacaaggaaggagattggatgctggtcggggatgttccttgggggatgttcacc 729
|||||||| || || |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 192 tatgaagataaagatggagattggatgcttgtcggggatgttccttgggagatgttcact 251
Query: 730 ggttcagtgaggagactacggatcatga 757
| ||| ||||||||| |||||||||
Sbjct: 252 gactcatgtaggagactaaggatcatga 279
>gnl|LJGI|BP046576 similar to UniRef100_Q7XYT5 Cluster: Auxin-induced protein 2; n=1;
Pinus taeda|Rep: Auxin-induced protein 2 - Pinus taeda
(Loblolly pine), partial (15%)
Length = 532
Score = 73.8 bits (37), Expect = 2e-12
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 685 ggagattggatgctggtcggggatgttccttgggggatgttcaccggttcagtgaggaga 744
|||||||||||||| ||||||||||||||||||| ||||||||| | ||| ||||||
Sbjct: 528 ggagattggatgcttgtcggggatgttccttgggagatgttcactgactcatgtaggaga 469
Query: 745 ctacggatcatga 757
||| |||||||||
Sbjct: 468 ctaaggatcatga 456
>gnl|LJGI|TC70802 similar to UniRef100_A7PEL3 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1570
Score = 69.9 bits (35), Expect = 2e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 660 tgtgctcacttatgaagacaaggaaggagattggatgctggtcggggatgttccttgggg 719
|||||| || |||||||||||||| || ||||||||||| || || |||||||| ||||
Sbjct: 885 tgtgctaacctatgaagacaaggatggtgattggatgctagttggtgatgttccctggga 944
Query: 720 gatgttcaccg 730
|||||||||||
Sbjct: 945 gatgttcaccg 955
>gnl|LJGI|TC77347 similar to UniRef100_O24543 Cluster: Auxin-induced protein 22E;
n=1; Vigna radiata var. radiata|Rep: Auxin-induced
protein 22E - Phaseolus aureus (Mung bean) (Vigna
radiata), partial (83%)
Length = 1083
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 667 acttatgaagacaaggaaggagattggatgctggtcggggatgttcc 713
|||||||| |||||||| || |||||||||||||| || ||||||||
Sbjct: 695 acttatgaggacaaggatggtgattggatgctggttggagatgttcc 741
>gnl|LJGI|TC69855 similar to UniRef100_P32294 Cluster: Auxin-induced protein 22B; n=1;
Vigna radiata var. radiata|Rep: Auxin-induced protein 22B
- Phaseolus aureus (Mung bean) (Vigna radiata), partial
(75%)
Length = 1944
Score = 54.0 bits (27), Expect = 1e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 667 acttatgaagacaaggaaggagattggatgctggtcggggatgttccttgggggatgtt 725
||||||||||||||||| || || |||||||| || || |||||||| |||| ||||||
Sbjct: 1327 acttatgaagacaaggatggtgactggatgctagttggagatgttccatgggagatgtt 1385
>gnl|LJGI|TC60581 similar to UniRef100_O24543 Cluster: Auxin-induced protein 22E;
n=1; Vigna radiata var. radiata|Rep: Auxin-induced
protein 22E - Phaseolus aureus (Mung bean) (Vigna
radiata), partial (83%)
Length = 1016
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 667 acttatgaagacaaggaaggagattggatgctggtcggggatgttcc 713
|||||||| |||||||| || |||||||||||||| || ||||||||
Sbjct: 620 acttatgaggacaaggatggtgattggatgctggttggagatgttcc 666