Miyakogusa Predicted Gene

Lj0g3v0343529.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0343529.1 Non Chatacterized Hit- tr|I1M8Q7|I1M8Q7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.38041 PE,38.14,3e-19,no
description,Copper amine oxidase, N2/N3-terminal; DUF3223,Protein of
unknown function DUF3223,CUFF.23565.1
         (510 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59796 weakly similar to UniRef100_A7Q5G0 Cluster: DNA...   987   0.0  

>gnl|LJGI|TC59796 weakly similar to UniRef100_A7Q5G0 Cluster: DNA-directed RNA
            polymerase; n=1; Vitis vinifera|Rep: DNA-directed RNA
            polymerase - Vitis vinifera (Grape), partial (7%)
          Length = 1597

 Score =  987 bits (498), Expect = 0.0
 Identities = 507/510 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgaaacatatgaatcgtcctggcagagtacctggaccaaggttggatatgtattcatct 60
            |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 867  atgaaaaataagaatcgtcctggcagagcacctggaccaaggttggatatgtattcatct 926

                                                                        
Query: 61   gaggaacaggatattctcaaggatattgaacctattgtccagtccatcagacgaataatg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  gaggaacaggatattctcaaggatattgaacctattgtccagtccatcagacgaataatg 986

                                                                        
Query: 121  caacaagaagggtacaatgatggggatccgctgggtgctgatgaccaacggtttatcctg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  caacaagaagggtacaatgatggggatccgctgggtgctgatgaccaacggtttatcctg 1046

                                                                        
Query: 181  gagaatgtctttgaacaccatccagagaaagaaaccaaaatgggcgctggcattgatttt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 gagaatgtctttgaacaccatccagagaaagaaaccaaaatgggcgctggcattgatttt 1106

                                                                        
Query: 241  gtcatggtaagcaggcacaccaattttcaggatagcagatgcctgtatgtggttttaaag 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 gtcatggtaagcaggcacaccaattttcaggatagcagatgcctgtatgtggttttaaag 1166

                                                                        
Query: 301  gatgggcgaagggaagacttctcgtaccgaaagtgcctggatagctggataaggaaaaaa 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 gatgggcgaagggaagacttctcgtaccgaaagtgcctggatagctggataaggaaaaaa 1226

                                                                        
Query: 361  tatcctgagattgctgaatcattcttaggcaaatatttccggaagccccgtcctagggac 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 tatcctgagattgctgaatcattcttaggcaaatatttccggaagccccgtcctagggac 1286

                                                                        
Query: 421  cagaccccaaatcaaacgcaggatcagacctcaactccagtgggggatcagcctcaaact 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 cagaccccaaatcaaacgcaggatcagacctcaactccagtgggggatcagcctcaaact 1346

                                          
Query: 481  ccggtgcctgcagaaaccaatgagtagaag 510
            ||||||||||||||||||||||||||||||
Sbjct: 1347 ccggtgcctgcagaaaccaatgagtagaag 1376