Miyakogusa Predicted Gene

Lj0g3v0343259.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0343259.1 Non Chatacterized Hit- tr|H2V8Y1|H2V8Y1_TAKRU
Uncharacterized protein (Fragment) OS=Takifugu rubripe,35,8.5,
,CUFF.23537.1
         (409 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV765789                                                     563   e-160
gnl|LJGI|BP061204                                                      62   3e-09

>gnl|LJGI|AV765789 
          Length = 549

 Score =  563 bits (284), Expect = e-160
 Identities = 284/284 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcataactataccacatcagccaggtctctgttccttataaaatgcagtccacaaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atgcataactataccacatcagccaggtctctgttccttataaaatgcagtccacaaatt 325

                                                                       
Query: 61  ccatcaaaggtggcaatttggccaaggtacaactacacaaccatcggccacgactcaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ccatcaaaggtggcaatttggccaaggtacaactacacaaccatcggccacgactcaata 385

                                                                       
Query: 121 accttctccaaattgatactatacttgtataatacaagaacacgggttcatcacccattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 accttctccaaattgatactatacttgtataatacaagaacacgggttcatcacccattc 445

                                                                       
Query: 181 ccattgcacactgaaattctttcacctctgaagagattcagatccaggctttccattgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ccattgcacactgaaattctttcacctctgaagagattcagatccaggctttccattgga 505

                                                       
Query: 241 tcacatccagcaaattgtcccagtcaggagcctcattggaaaac 284
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tcacatccagcaaattgtcccagtcaggagcctcattggaaaac 549


>gnl|LJGI|BP061204 
          Length = 241

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                          
Query: 1   atgcataactataccacatcagccaggtctc 31
           |||||||||||||||||||||||||||||||
Sbjct: 121 atgcataactataccacatcagccaggtctc 151