Miyakogusa Predicted Gene
- Lj0g3v0342589.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0342589.1 Non Chatacterized Hit- tr|I1MC56|I1MC56_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48993
PE,80.55,0,Auxin_resp,Auxin response factor; AUX_IAA,AUX/IAA protein;
B3,B3 DNA binding domain; FAMILY NOT NAME,CUFF.23484.1
(2784 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81270 similar to UniRef100_A7NSY4 Cluster: Chromosome... 660 0.0
gnl|LJGI|FS337455 similar to UniRef100_O61649 Cluster: Pyrrolido... 224 2e-57
gnl|LJGI|GO041746 similar to UniRef100_P93024 Cluster: Auxin res... 133 7e-30
gnl|LJGI|AV781081 similar to UniRef100_A7NSY4 Cluster: Chromosom... 94 6e-18
gnl|LJGI|AV409033 homologue to UniRef100_Q6L8U3 Cluster: Auxin r... 72 2e-11
gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromos... 60 8e-08
gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromos... 60 8e-08
gnl|LJGI|TC76192 similar to UniRef100_A7PFD6 Cluster: Chromosome... 54 5e-06
>gnl|LJGI|TC81270 similar to UniRef100_A7NSY4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 786
Score = 660 bits (333), Expect = 0.0
Identities = 333/333 (100%)
Strand = Plus / Plus
Query: 2452 actcccatcagaacctacaccaaggtgcaaaaggcaggttctgtgggaagatcaattgat 2511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 actcccatcagaacctacaccaaggtgcaaaaggcaggttctgtgggaagatcaattgat 60
Query: 2512 gtcactactttcaagaactatgaggagttgattcgcgcaattgaatgcatgtttggactc 2571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtcactactttcaagaactatgaggagttgattcgcgcaattgaatgcatgtttggactc 120
Query: 2572 gatggtttgttgaatgacactaaaggttccgggtggaaattggtgtatgtagattatgag 2631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatggtttgttgaatgacactaaaggttccgggtggaaattggtgtatgtagattatgag 180
Query: 2632 agtgatgttctacttgtaggtgatgatccttgggaagaatttgtggggtgtgtccggtgt 2691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtgatgttctacttgtaggtgatgatccttgggaagaatttgtggggtgtgtccggtgt 240
Query: 2692 atcagaattttatcaccttcagaagttcaacagatgagtgaagagggcatgaagcttctg 2751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcagaattttatcaccttcagaagttcaacagatgagtgaagagggcatgaagcttctg 300
Query: 2752 aatagtggagccttgcaagggatcaatgtttga 2784
|||||||||||||||||||||||||||||||||
Sbjct: 301 aatagtggagccttgcaagggatcaatgtttga 333
>gnl|LJGI|FS337455 similar to UniRef100_O61649 Cluster: Pyrrolidone-rich antigen; n=1;
Onchocerca volvulus|Rep: Pyrrolidone-rich antigen -
Onchocerca volvulus, partial (15%)
Length = 729
Score = 224 bits (113), Expect = 2e-57
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 1 atggcttccgtagaagaaaagattaaaactggaggagtaggagtaggtgttggtgttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atggcttccgtagaagaaaagattaaaactggaggagtaggagtaggtgttggtgttgga 676
Query: 61 gttgttgggggtcaaactcaaactcaaaatcttgttgctgagatgaaactgct 113
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gttgttgggggtcaaactcaaactcaaaatcttgttgctgagatgaaactgct 729
>gnl|LJGI|GO041746 similar to UniRef100_P93024 Cluster: Auxin response factor 5; n=3;
Arabidopsis thaliana|Rep: Auxin response factor 5 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 884
Score = 133 bits (67), Expect = 7e-30
Identities = 161/191 (84%), Gaps = 1/191 (0%)
Strand = Plus / Minus
Query: 2478 gcaaaaggcaggttctgtgggaagatcaattgatgtcactactttcaagaactatg-agg 2536
|||||||||||||||||| ||||| |||||||||||||| |||||||||||||||| | |
Sbjct: 508 gcaaaaggcaggttctgtaggaagttcaattgatgtcaccactttcaagaactatgaacg 449
Query: 2537 agttgattcgcgcaattgaatgcatgtttggactcgatggtttgttgaatgacactaaag 2596
| |||| | |||||||| |||||||||||||| |||| || |||| || || | |
Sbjct: 448 aactgatccatgcaattgagtgcatgtttggactgactggtctgctgaacgatacaagtg 389
Query: 2597 gttccgggtggaaattggtgtatgtagattatgagagtgatgttctacttgtaggtgatg 2656
|||| || ||||||||||| ||||| |||||||||| ||||||||| ||||| | ||||
Sbjct: 388 gttcaggatggaaattggtatatgtggattatgagaatgatgttctgcttgtgcgggatg 329
Query: 2657 atccttgggaa 2667
|||||||||||
Sbjct: 328 atccttgggaa 318
>gnl|LJGI|AV781081 similar to UniRef100_A7NSY4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 528
Score = 93.7 bits (47), Expect = 6e-18
Identities = 92/107 (85%)
Strand = Plus / Plus
Query: 146 cagagttatggcatgcttgtgctggccctcttgtatcattgcctcaagttgggagccttg 205
||||||||||||||||||| || |||||||||||||| |||||||| | || || ||||
Sbjct: 414 cagagttatggcatgcttgcgcaggccctcttgtatccttgcctcagttaggaagtcttg 473
Query: 206 tgtattacttccctcagggacatagtgagcaggtggcagcttctact 252
|||||||| ||||||||||||| |||||||| || |||||||||
Sbjct: 474 cttattactttcctcagggacatatcgagcaggtagctgcttctact 520
>gnl|LJGI|AV409033 homologue to UniRef100_Q6L8U3 Cluster: Auxin response factor 1;
n=1; Cucumis sativus|Rep: Auxin response factor 1 -
Cucumis sativus (Cucumber), partial (13%)
Length = 418
Score = 71.9 bits (36), Expect = 2e-11
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 145 tcagagttatggcatgcttgtgctggccctcttgtatcattgcctcaagttgggagcctt 204
||||| |||||||||||||||||||| ||| | || || ||||||| ||||| || |||
Sbjct: 48 tcagaattatggcatgcttgtgctggacctttggtttctttgcctcctgttggaagtctt 107
Query: 205 gtgtattacttccctcagggacatagtgagcaggtggcagcttc 248
||| ||||||||| || ||||| |||||||| || ||||||||
Sbjct: 108 gtggtttacttcccgcaaggacacagtgagcaagttgcagcttc 151
>gnl|LJGI|BP042557 homologue to UniRef100_A7PJQ8 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 545
Score = 60.0 bits (30), Expect = 8e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 804 tgatagcatgcacattggtgtgcttgctgctgcagctcatgc 845
|||||||||||||||||| | ||||||||||||||||||||
Sbjct: 412 tgatagcatgcacattggccttcttgctgctgcagctcatgc 453
>gnl|LJGI|AV410062 homologue to UniRef100_A7Q186 Cluster: Chromosome chr10
scaffold_43, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr10 scaffold_43, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 435
Score = 60.0 bits (30), Expect = 8e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 456 tttctgcaaaactttgactgctagtgacaccagcacacatgg 497
||||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 287 tttctgcaagactttgactgctagtgacacaagcactcatgg 328
>gnl|LJGI|TC76192 similar to UniRef100_A7PFD6 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1280
Score = 54.0 bits (27), Expect = 5e-06
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 2617 tatgtagattatgagagtgatgttctacttgtaggtgatgatccttgggaagaatttgt 2675
||||||||| ||||| ||||||||||||| || || ||||| |||||||| || |||||
Sbjct: 313 tatgtagatcatgagggtgatgttctactagtgggagatgacccttgggaggagtttgt 371