Miyakogusa Predicted Gene

Lj0g3v0342209.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0342209.1 Non Chatacterized Hit- tr|I1MZS8|I1MZS8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18508
PE,77.56,0,seg,NULL; CTP_transf_1,Phosphatidate cytidylyltransferase;
SUBFAMILY NOT NAMED,NULL; PHOSPHATIDATE C,CUFF.23451.1
         (1158 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV411768 similar to UniRef100_A7PYF5 Cluster: Chromosom...   474   e-133
gnl|LJGI|AV767982 homologue to UniRef100_A7PYF5 Cluster: Chromos...   186   2e-46

>gnl|LJGI|AV411768 similar to UniRef100_A7PYF5 Cluster: Chromosome chr15 scaffold_37,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_37, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (11%)
          Length = 427

 Score =  474 bits (239), Expect = e-133
 Identities = 239/239 (100%)
 Strand = Plus / Plus

                                                                       
Query: 127 ctccggttcacccgccgaaccgccgaaccggttcaaccccgtttcctcgtcgccgccgtc 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctccggttcacccgccgaaccgccgaaccggttcaaccccgtttcctcgtcgccgccgtc 248

                                                                       
Query: 187 ggtcaagccgagccggaacgccttcctcaactcaatgcccaacaggaggattttctctca 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggtcaagccgagccggaacgccttcctcaactcaatgcccaacaggaggattttctctca 308

                                                                       
Query: 247 aaatctccgcagcaagttagtcaattaaagaacagagttgtttttggacttggcattggg 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaatctccgcagcaagttagtcaattaaagaacagagttgtttttggacttggcattggg 368

                                                                      
Query: 307 atttctgtgggtggtatcgttttggctggaggatgggttttcgcagctgccttgtctgc 365
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atttctgtgggtggtatcgttttggctggaggatgggttttcgcagctgccttgtctgc 427



 Score =  123 bits (62), Expect = 3e-27
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctcaccctcaactcagtaactcgctctctctccatcccaatctcattcccctttat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  atggctcaccctcaactcagtaactcgctctctctccatcccaatctcattcccctttat 122

             
Query: 61  cg 62
           ||
Sbjct: 123 cg 124


>gnl|LJGI|AV767982 homologue to UniRef100_A7PYF5 Cluster: Chromosome chr15 scaffold_37,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_37, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (8%)
          Length = 508

 Score =  186 bits (94), Expect = 2e-46
 Identities = 101/102 (99%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1058 ctggtcatggtggaatactagacagagcagacagttatgtttt-cacgggtgcgcttgca 1116
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 508  ctggtcatggtggaatactagacagagcagacagttatgtttttcacgggtgcgcttgca 449

                                                      
Query: 1117 cactcctttgtcaaaacctttctacctctctatggagtatga 1158
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448  cactcctttgtcaaaacctttctacctctctatggagtatga 407