Miyakogusa Predicted Gene

Lj0g3v0342159.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0342159.1 Non Chatacterized Hit- tr|I1LX42|I1LX42_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53128
PE,59.65,6e-19,seg,NULL,CUFF.23447.1
         (399 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62329 similar to UniRef100_Q0JK91 Cluster: Os01g06896...   718   0.0  

>gnl|LJGI|TC62329 similar to UniRef100_Q0JK91 Cluster: Os01g0689600 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os01g0689600 protein -
           Oryza sativa subsp. japonica (Rice), partial (8%)
          Length = 715

 Score =  718 bits (362), Expect = 0.0
 Identities = 362/362 (100%)
 Strand = Plus / Plus

                                                                       
Query: 38  caatggcgtcctcactatgcctgcaacccaatttcaaccctaaaggcgtcaccaaagacc 97
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caatggcgtcctcactatgcctgcaacccaatttcaaccctaaaggcgtcaccaaagacc 60

                                                                       
Query: 98  agctctccaagtttcgggaactgcacaggaaacgcttacaactaaagtcaaaatcaaaat 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agctctccaagtttcgggaactgcacaggaaacgcttacaactaaagtcaaaatcaaaat 120

                                                                       
Query: 158 caaagtttaaaacgaaatccaaagatgtgaccaataagaagttccagggatatgatttat 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaagtttaaaacgaaatccaaagatgtgaccaataagaagttccagggatatgatttat 180

                                                                       
Query: 218 caagccagagcagtgaagctcaaggtttgaaaattgatgacaaagatggtgaatgctctg 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caagccagagcagtgaagctcaaggtttgaaaattgatgacaaagatggtgaatgctctg 240

                                                                       
Query: 278 attctcaaaatacagactcaaagggtggtggtgtattagtgccttcttcatcaaagaaac 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attctcaaaatacagactcaaagggtggtggtgtattagtgccttcttcatcaaagaaac 300

                                                                       
Query: 338 aaaaattgcattgggggcttgacaccaaggagaggtgggagaggaaatccaacatgtaga 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaaattgcattgggggcttgacaccaaggagaggtgggagaggaaatccaacatgtaga 360

             
Query: 398 ta 399
           ||
Sbjct: 361 ta 362