Miyakogusa Predicted Gene

Lj0g3v0342139.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0342139.3 Non Chatacterized Hit- tr|I1MU43|I1MU43_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25205
PE,85.38,0,seg,NULL; EXOSTOSIN FAMILY PROTEIN,NULL; EXOSTOSIN (HEPARAN
SULFATE GLYCOSYLTRANSFERASE)-RELATED,NUL,CUFF.23442.3
         (1032 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025815 similar to UniRef100_A4Q7M7 Cluster: Exostosin...   341   5e-93
gnl|LJGI|TC74012 similar to UniRef100_A7PPN8 Cluster: Chromosome...    52   7e-06
gnl|LJGI|TC73599 similar to UniRef100_A7PEJ3 Cluster: Chromosome...    52   7e-06

>gnl|LJGI|GO025815 similar to UniRef100_A4Q7M7 Cluster: Exostosin-like; n=1; Medicago
           truncatula|Rep: Exostosin-like - Medicago truncatula
           (Barrel medic), partial (16%)
          Length = 683

 Score =  341 bits (172), Expect = 5e-93
 Identities = 179/180 (99%), Gaps = 1/180 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaatgatgaagagattcaaggtgtgggtatacaaggaaggagagcaaccattgatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atggaaatgatgaagagattcaaggtgtgggtatacaaggaaggagagcaaccattgatg 564

                                                                       
Query: 61  catgatggacctgtaaacaacaaatattctattgaaggtcaattcattgatgaaatagac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catgatggacctgtaaacaacaaatattctattgaaggtcaattcattgatgaaatagac 624

                                                                       
Query: 121 acaagtaacaagagccccttcatggctagccatcctgaacaggctcatgtcttctttctt 180
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 625 acaagtaacaagagccccttcatggctagccatcctgaaca-gctcatgtcttctttctt 683


>gnl|LJGI|TC74012 similar to UniRef100_A7PPN8 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (93%)
          Length = 1237

 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 676 agcaagttctgcttgtgccccagtgggcatgaagtggcaagtcctagggtggtggaagca 735
           |||||||||||| | ||||| |||||| |||| || ||||| || || ||||||||||||
Sbjct: 744 agcaagttctgcctttgcccaagtgggtatgaggttgcaagccccagagtggtggaagca 803

             
Query: 736 at 737
           ||
Sbjct: 804 at 805


>gnl|LJGI|TC73599 similar to UniRef100_A7PEJ3 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 489

 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 324 aggtgctgaccattttctggtttcatgccatgattggg 361
           ||||||||| |||||||||||| | |||||||||||||
Sbjct: 428 aggtgctgatcattttctggttgcttgccatgattggg 465