Miyakogusa Predicted Gene

Lj0g3v0342059.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0342059.1 tr|G7J5Q3|G7J5Q3_MEDTR Thylakoidal processing
peptidase OS=Medicago truncatula GN=MTR_3g100960 PE=3
,85.11,0.00000000000006,
,gene.Ljchr0_pseudomol_20120828.path1.gene35454.1
         (145 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66459 weakly similar to UniRef100_A7NTP1 Cluster: Chr...   262   5e-70
gnl|LJGI|TC60943 similar to UniRef100_A7NTP1 Cluster: Chromosome...   262   5e-70

>gnl|LJGI|TC66459 weakly similar to UniRef100_A7NTP1 Cluster: Chromosome chr18
           scaffold_1, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (22%)
          Length = 614

 Score =  262 bits (132), Expect = 5e-70
 Identities = 138/140 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctaaccgagcaaccttctccttctcccgctacgtcgcgcagaatctcgtctcctct 60
           ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 310 atggctatccgagcaaccttctccttctccggctacgtcgcgcagaatctcgtctcctct 369

                                                                       
Query: 61  gccggcgtccgtgtcgccaactcccgttgcgtccaagaatgctggatcctctcccgcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gccggcgtccgtgtcgccaactcccgttgcgtccaagaatgctggatcctctcccgcttc 429

                               
Query: 121 tttggaaccaaccagaagcc 140
           ||||||||||||||||||||
Sbjct: 430 tttggaaccaaccagaagcc 449


>gnl|LJGI|TC60943 similar to UniRef100_A7NTP1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (82%)
          Length = 1887

 Score =  262 bits (132), Expect = 5e-70
 Identities = 138/140 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctaaccgagcaaccttctccttctcccgctacgtcgcgcagaatctcgtctcctct 60
           ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 318 atggctatccgagcaaccttctccttctccggctacgtcgcgcagaatctcgtctcctct 377

                                                                       
Query: 61  gccggcgtccgtgtcgccaactcccgttgcgtccaagaatgctggatcctctcccgcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gccggcgtccgtgtcgccaactcccgttgcgtccaagaatgctggatcctctcccgcttc 437

                               
Query: 121 tttggaaccaaccagaagcc 140
           ||||||||||||||||||||
Sbjct: 438 tttggaaccaaccagaagcc 457