Miyakogusa Predicted Gene

Lj0g3v0341889.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0341889.1 tr|I1LB84|I1LB84_SOYBN Pectinesterase (Fragment)
OS=Glycine max PE=3 SV=1,73.28,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Plant invertase/pectin methylesterase
inhibi,Pectin,CUFF.23425.1
         (1614 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin met...    74   3e-12
gnl|LJGI|TC69590 similar to UniRef100_A7PYC6 Cluster: Chromosome...    72   1e-11
gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome...    70   5e-11
gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome...    68   2e-10
gnl|LJGI|TC61921 similar to UniRef100_Q708X4 Cluster: Pectin met...    58   2e-07

>gnl|LJGI|TC79941 similar to UniRef100_A0ZNJ9 Cluster: Pectin methylesterase 1; n=1;
            Pyrus communis|Rep: Pectin methylesterase 1 - Pyrus
            communis (Pear), partial (40%)
          Length = 825

 Score = 73.8 bits (37), Expect = 3e-12
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1102 gacatctacggcaccgtcgacttcatcttcggcaacgccgccgcagttttccaaaactgc 1161
            ||||||||||||||||| |||||||| ||| |||| ||||| | ||||||||||||||||
Sbjct: 696  gacatctacggcaccgtagacttcatattcagcaatgccgcggtagttttccaaaactgc 755

             
Query: 1162 a 1162
            |
Sbjct: 756  a 756


>gnl|LJGI|TC69590 similar to UniRef100_A7PYC6 Cluster: Chromosome chr15 scaffold_37,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_37, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (44%)
          Length = 902

 Score = 71.9 bits (36), Expect = 1e-11
 Identities = 105/128 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1030 tacagttgcagcttcgaaggccaccaagacacactctacgcccactccttccgccaattc 1089
            ||||| |||||||| |||||| |||||||||||||||| | ||| |||  | | ||||||
Sbjct: 131  tacagatgcagctttgaaggctaccaagacacactctatgtccattccgacagacaattc 190

                                                                        
Query: 1090 tacaaaacctgcgacatctacggcaccgtcgacttcatcttcggcaacgccgccgcagtt 1149
            |||| |   ||| ||||||||||||| || |||||||| ||||| ||||| || || || 
Sbjct: 191  tacagagaatgcaacatctacggcacagttgacttcatattcggtaacgcggctgccgta 250

                    
Query: 1150 ttccaaaa 1157
            ||||||||
Sbjct: 251  ttccaaaa 258


>gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome chr15 scaffold_37,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr15 scaffold_37, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (44%)
          Length = 1064

 Score = 69.9 bits (35), Expect = 5e-11
 Identities = 110/135 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1027 ttctacagttgcagcttcgaaggccaccaagacacactctacgcccactccttccgccaa 1086
            |||||||| ||||||||| ||| | |||| ||||| |||||||  ||||||  |||||||
Sbjct: 240  ttctacaggtgcagcttcaaagcctaccaggacactctctacgtgcactccaaccgccaa 299

                                                                        
Query: 1087 ttctacaaaacctgcgacatctacggcaccgtcgacttcatcttcggcaacgccgccgca 1146
            ||||||     |||| |||| ||||||||| | ||||||||||| ||  ||||||| |||
Sbjct: 300  ttctaccgcgactgccacatatacggcaccatagacttcatctttggggacgccgcagca 359

                           
Query: 1147 gttttccaaaactgc 1161
            ||| | |||||||||
Sbjct: 360  gttctgcaaaactgc 374


>gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome undetermined
            scaffold_71, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_71, whole
            genome shotgun sequence - Vitis vinifera (Grape),
            complete
          Length = 999

 Score = 67.9 bits (34), Expect = 2e-10
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1011 cgccgacatgtccaccttctacagttgcagcttcgaaggccaccaagacacactctacgc 1070
            ||||||| ||||||| |||||| ||||||||||||||||  | |||||||||||||| | 
Sbjct: 287  cgccgacctgtccactttctaccgttgcagcttcgaagggtatcaagacacactctatgt 346

                  
Query: 1071 ccactc 1076
            ||||||
Sbjct: 347  ccactc 352


>gnl|LJGI|TC61921 similar to UniRef100_Q708X4 Cluster: Pectin methylesterase; n=1;
            Cicer arietinum|Rep: Pectin methylesterase - Cicer
            arietinum (Chickpea) (Garbanzo), partial (89%)
          Length = 2214

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                     
Query: 1205 tcacagctcagggccgcatagacccgaaccagaacaccggc 1245
            ||||||| ||||||||| | |||||||||||||||||||||
Sbjct: 1444 tcacagcccagggccgcgtggacccgaaccagaacaccggc 1484