Miyakogusa Predicted Gene

Lj0g3v0341619.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0341619.1 Non Chatacterized Hit- tr|I1K6C9|I1K6C9_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,82.24,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; seg,NULL; AAA-FAMILY,CUFF.23400.1
         (1497 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS345842 similar to UniRef100_A7QNG1 Cluster: Chromosom...    70   4e-11
gnl|LJGI|TC64984 similar to UniRef100_A7QGD3 Cluster: Chromosome...    60   4e-08

>gnl|LJGI|FS345842 similar to UniRef100_A7QNG1 Cluster: Chromosome chr2 scaffold_132,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_132, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (22%)
          Length = 719

 Score = 69.9 bits (35), Expect = 4e-11
 Identities = 86/103 (83%)
 Strand = Plus / Minus

                                                                        
Query: 1115 ttgattgtgatgacctggattccatctgtgtagcagacacaatggttctcagtaactata 1174
            |||||||||||||| || |||| |||||    |||||||| ||| | |||||||| ||||
Sbjct: 111  ttgattgtgatgacttgaattcaatctgccatgcagacactatgatactcagtaattata 52

                                                       
Query: 1175 ttgaagagattattgtgtcagcaatttcttatcatttgatgaa 1217
            ||||||| ||| |||| || ||||| || ||||||||||||||
Sbjct: 51   ttgaagaaattgttgtatctgcaatatcatatcatttgatgaa 9


>gnl|LJGI|TC64984 similar to UniRef100_A7QGD3 Cluster: Chromosome undetermined
           scaffold_91, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_91, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (29%)
          Length = 711

 Score = 60.0 bits (30), Expect = 4e-08
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 337 gcagaactttaccaacagatgcttgccaaggctttagctcattactttga 386
           |||||||||||||| || |||||||| || |||||||| |||||||||||
Sbjct: 578 gcagaactttaccagcaaatgcttgcaaaagctttagcacattactttga 627