Miyakogusa Predicted Gene

Lj0g3v0340779.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0340779.1 tr|Q7XJW6|Q7XJW6_ORYSJ OSJNBa0016O02.4 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0016O02.4
PE,34.94,2e-18,seg,NULL; coiled-coil,NULL; Ipi1_N,IPI1-like domain;
TESTIS EXPRESSED GENE 10-RELATED,NULL; UNCHARAC,CUFF.23328.1
         (1425 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS320363 similar to UniRef100_A7PP51 Cluster: Chromosom...   527   e-149
gnl|LJGI|FS319816 similar to UniRef100_A7PP51 Cluster: Chromosom...   256   3e-67

>gnl|LJGI|FS320363 similar to UniRef100_A7PP51 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (30%)
          Length = 813

 Score =  527 bits (266), Expect = e-149
 Identities = 266/266 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggataatcaagagctgatcacttctttattgatggcttacattttcaatgccatgacaca 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ggataatcaagagctgatcacttctttattgatggcttacattttcaatgccatgacaca 607

                                                                       
Query: 63  tttggcggttgaaattcggatcatggcatttgatttcttagaccttgttctggactttta 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 tttggcggttgaaattcggatcatggcatttgatttcttagaccttgttctggactttta 667

                                                                       
Query: 123 tcctccctccttttcttctaacgcagaaaaggtttttcaaaattatgaggacattcttag 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tcctccctccttttcttctaacgcagaaaaggtttttcaaaattatgaggacattcttag 727

                                                                       
Query: 183 gaagaacaagtactatttacaggacaaaggaaaactaaaagatgctcttactgggttggt 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gaagaacaagtactatttacaggacaaaggaaaactaaaagatgctcttactgggttggt 787

                                     
Query: 243 tcgctgcttgtcactccttccatgga 268
           ||||||||||||||||||||||||||
Sbjct: 788 tcgctgcttgtcactccttccatgga 813


>gnl|LJGI|FS319816 similar to UniRef100_A7PP51 Cluster: Chromosome chr8 scaffold_23,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_23, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (24%)
          Length = 738

 Score =  256 bits (129), Expect = 3e-67
 Identities = 129/129 (100%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggataatcaagagctgatcacttctttattgatggcttacattttcaatgccatgacaca 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggataatcaagagctgatcacttctttattgatggcttacattttcaatgccatgacaca 669

                                                                       
Query: 63  tttggcggttgaaattcggatcatggcatttgatttcttagaccttgttctggactttta 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tttggcggttgaaattcggatcatggcatttgatttcttagaccttgttctggactttta 729

                    
Query: 123 tcctccctc 131
           |||||||||
Sbjct: 730 tcctccctc 738