Miyakogusa Predicted Gene
- Lj0g3v0340729.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0340729.1 tr|G8A2Z6|G8A2Z6_MEDTR B3 domain-containing
protein OS=Medicago truncatula GN=MTR_140s0010 PE=4
SV=1,39.68,4e-18,no description,DNA-binding pseudobarrel domain; B3,B3
DNA binding domain; B3 DNA binding domain,B3 D,CUFF.23320.1
(1590 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Tr... 268 1e-70
gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Tra... 226 3e-58
gnl|LJGI|FS343023 similar to UniRef100_Q5D1M3 Cluster: Class III... 210 2e-53
gnl|LJGI|TC78770 weakly similar to UniRef100_A9SGA4 Cluster: Pre... 86 8e-16
gnl|LJGI|TC73841 similar to UniRef100_A7P9A4 Cluster: Chromosome... 80 5e-14
>gnl|LJGI|DC596542 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
B3; n=1; Medicago truncatula|Rep: Transcriptional factor
B3 - Medicago truncatula (Barrel medic), partial (20%)
Length = 409
Score = 268 bits (135), Expect = 1e-70
Identities = 243/279 (87%)
Strand = Plus / Plus
Query: 390 tttctttaggatcatcacaccaccatgtcttgaagctggagagcttattcttccaaatgg 449
|||||||| |||||||||| || |||| ||||||||||| | |||| || ||||||||
Sbjct: 131 tttctttaagatcatcacaacaacatgcattgaagctggaaaacttaagctcccaaatgg 190
Query: 450 tttcatgaagaaatacagtggtggcatgtcaaacccagtatttctcaaggcccctgataa 509
|||||| |||||||||||||||| ||| ||||||||||| |||||||| ||||||||||
Sbjct: 191 tttcattaagaaatacagtggtgatatgccaaacccagtaattctcaagccccctgataa 250
Query: 510 cattagttgggaggtacactggagcaaacatgattcatatttttggttccaaaagggttg 569
|| |||||||||| |||| ||||| ||||||||||| || ||||||| |||||||||||
Sbjct: 251 cactagttgggagatacattggagtaaacatgattctgatatttggtttcaaaagggttg 310
Query: 570 gaaagagtttgtgaaatattactcccttgatcatgggcatttggtattgtttgaattcaa 629
| |||| |||| ||||||||||||||| | |||||||| ||||| ||||||||||||||
Sbjct: 311 ggaagaatttgcgaaatattactccctctaccatgggcacttggttttgtttgaattcaa 370
Query: 630 ggatgcttctgattttggggtacacatatttgataagag 668
|||||||||| |||||||||| || |||||||| |||||
Sbjct: 371 ggatgcttctcattttggggtgcatatatttgacaagag 409
Score = 167 bits (84), Expect = 3e-40
Identities = 189/224 (84%)
Strand = Plus / Plus
Query: 22 aagaactctccaatccgattctttaagatcatcaccacaacaagtattgaaggtggaaat 81
||||||||| ||||| | ||||||||||||||||| |||||| | ||||||| ||||||
Sbjct: 114 aagaactctgcaatctgtttctttaagatcatcacaacaacatgcattgaagctggaaaa 173
Query: 82 cttaaacttccaaatgctttcactaggaaatacaatggtgaaatgtcaaatccagtattt 141
||||| || ||||||| ||||| || |||||||| |||||| ||| |||| |||||| ||
Sbjct: 174 cttaagctcccaaatggtttcattaagaaatacagtggtgatatgccaaacccagtaatt 233
Query: 142 ctcaagcctcttgataatattagctggaagataaactggagtaaacaagattcagatatt 201
|||||||| | |||||| | ||| ||| ||||| | ||||||||||| ||||| ||||||
Sbjct: 234 ctcaagccccctgataacactagttgggagatacattggagtaaacatgattctgatatt 293
Query: 202 tggttacaaaatgtttgggaggaatttgtgaaactttactccct 245
||||| ||||| | |||||| ||||||| |||| |||||||||
Sbjct: 294 tggtttcaaaagggttgggaagaatttgcgaaatattactccct 337
>gnl|LJGI|TC82071 weakly similar to UniRef100_A2Q2N6 Cluster: Transcriptional factor
B3; n=1; Medicago truncatula|Rep: Transcriptional factor
B3 - Medicago truncatula (Barrel medic), partial (24%)
Length = 744
Score = 226 bits (114), Expect = 3e-58
Identities = 171/190 (90%)
Strand = Plus / Plus
Query: 551 tttggttccaaaagggttggaaagagtttgtgaaatattactcccttgatcatgggcatt 610
||||||| ||||| ||||||||||| |||| ||||||||||||||| ||||| || ||
Sbjct: 275 tttggtttcaaaatggttggaaagattttgcgaaatattactccctcgatcacggacaca 334
Query: 611 tggtattgtttgaattcaaggatgcttctgattttggggtacacatatttgataagagca 670
|||| |||||||||| ||||||| ||||| ||||||||||||| ||||||||||||||||
Sbjct: 335 tggtgttgtttgaatacaaggattcttctcattttggggtacatatatttgataagagca 394
Query: 671 cccttgaaatagaatatccttcaaatgagaatcaaggtgaagagcacaaccctgatcaga 730
||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 395 cccttgaaataagatatccttcacatgagaatcaagatgaagagcacaaccctgatcaga 454
Query: 731 ttggtgatga 740
||| ||||||
Sbjct: 455 ttgatgatga 464
Score = 69.9 bits (35), Expect = 5e-11
Identities = 105/127 (82%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 26 actctccaatccgattctttaagatcatcaccacaacaagtattgaag-gtggaaatctt 84
|||||||||||| ||||||||||||||||| || ||||||||||||| ||||| | |||
Sbjct: 100 actctccaatccttttctttaagatcatcacaacgacaagtattgaagcgtggagagctt 159
Query: 85 aaacttccaaatgctttcactaggaaatacaatggtgaaatgtcaaatccagtatttctc 144
| ||||||| |||||||| || ||| |||||| |||||||| ||| | ||||||
Sbjct: 160 aggattccaaacaatttcactaagacatatggtggtgatatgtcaaacccaatgtttctc 219
Query: 145 aagcctc 151
|||||||
Sbjct: 220 aagcctc 226
>gnl|LJGI|FS343023 similar to UniRef100_Q5D1M3 Cluster: Class III HD-Zip protein 4;
n=1; Populus trichocarpa|Rep: Class III HD-Zip protein 4
- Populus trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (4%)
Length = 750
Score = 210 bits (106), Expect = 2e-53
Identities = 121/126 (96%)
Strand = Plus / Plus
Query: 310 gtgcgtatatttgacaagaacacccttgaaataaaataccatccactcagtaacaagcaa 369
||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||
Sbjct: 355 gtgcgtatatttgacaagaacgcccttgaaataaaataccttccacttagtaacaagcaa 414
Query: 370 attccgaactcagcaacccatttctttaggatcatcacaccaccatgtcttgaagctgga 429
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 415 attccgaactcagcaacccgtttctttaggatcatcacactaccatgtcttgaagctgga 474
Query: 430 gagctt 435
||||||
Sbjct: 475 gagctt 480
>gnl|LJGI|TC78770 weakly similar to UniRef100_A9SGA4 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(17%)
Length = 516
Score = 85.7 bits (43), Expect = 8e-16
Identities = 109/131 (83%)
Strand = Plus / Plus
Query: 1411 ttgtggcctgtggagtttatatattatccagaatatggttcaggcaagttgtctaaaggt 1470
|||||||||||| |||| || | |||||| || | ||||||||||||||||| |||||
Sbjct: 171 ttgtggcctgtgaagttgatctgttatcccaaaaaaggttcaggcaagttgtcccaaggt 230
Query: 1471 tggatacaatttgcaagagaaagtaaacttgtaggtggagatgtttgtgtgtttgaactc 1530
||| | ||||||| || |||||||| | |||| |||||||| |||||||||||| |||
Sbjct: 231 tgggtcgaatttgctggaaaaagtaaattggtagttggagatgcttgtgtgtttgagctc 290
Query: 1531 atcaacaagga 1541
||||| |||||
Sbjct: 291 atcaataagga 301
>gnl|LJGI|TC73841 similar to UniRef100_A7P9A4 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 480
Score = 79.8 bits (40), Expect = 5e-14
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 1455 caagttgtctaaaggttggatacaatttgcaagagaaagtaaacttgtaggtggagatgt 1514
||||||||| ||||||||| | ||||||| ||||||||||| | |||| |||||||||
Sbjct: 200 caagttgtccaaaggttgggccctatttgcaggagaaagtaaattggtagctggagatgt 259
Query: 1515 ttgtgtgtttgaactcatcaacaa 1538
|||||| ||||| |||||||||||
Sbjct: 260 ttgtgtctttgagctcatcaacaa 283