Miyakogusa Predicted Gene
- Lj0g3v0340419.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0340419.1 tr|Q2HW84|Q2HW84_MEDTR Cyclin-like F-box
OS=Medicago truncatula GN=MtrDRAFT_AC147774g10v1 PE=4
SV=1,28.48,4e-17,FBOX,F-box domain, cyclin-like; seg,NULL; F-box
domain,F-box domain, cyclin-like; no description,NUL,CUFF.23316.1
(1071 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73194 weakly similar to UniRef100_A7QK65 Cluster: Chr... 2115 0.0
gnl|LJGI|FS326727 weakly similar to UniRef100_P0C2G1 Cluster: F-... 72 8e-12
>gnl|LJGI|TC73194 weakly similar to UniRef100_A7QK65 Cluster: Chromosome chr19
scaffold_111, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_111, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 1713
Score = 2115 bits (1067), Expect = 0.0
Identities = 1070/1071 (99%)
Strand = Plus / Plus
Query: 1 atggaatcccccaaaaggcatgaatccaatgagaatgaggatcaggacatgataagtaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atggaatcccccaaaaggcatgaatccaatgagaatgaggatcaggacatgataagtaac 249
Query: 61 ctccctgacgtcattattggtcgcattctttctcttcttcctaccaaagatgcagtctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctccctgacgtcattattggtcgcattctttctcttcttcctaccaaagatgcagtctcc 309
Query: 121 acaagtcttttatccaagagttggttatacaaatggacatttattacgcagctagaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 acaagtcttttatccaagagttggttatacaaatggacatttattacgcagctagaattt 369
Query: 181 caagataaagagtgttcttcatccaagaaaataagcaaagatttatttgtgagctttgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caagataaagagtgttcttcatccaagaaaataagcaaagatttatttgtgagctttgtg 429
Query: 241 tacagggtactacttcatctgaatagttcaggcatccagagtttctcccttgatatgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tacagggtactacttcatctgaatagttcaggcatccagagtttctcccttgatatgtca 489
Query: 301 gaggattatgaagctattcacgtggatgagtggatatctgctgttgtaagccggggagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gaggattatgaagctattcacgtggatgagtggatatctgctgttgtaagccggggagtc 549
Query: 361 aaaatgctttgtgtcgattcagaccagaaaggaaacctttcctctcattcccttatgaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aaaatgctttgtgtcgattcagaccagaaaggaaacctttcctctcattcccttatgaaa 609
Query: 421 tacaagaccttagaggagctagtgctatatgcgtatggttgtgagattgaagttccgacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tacaagaccttagaggagctagtgctatatgcgtatggttgtgagattgaagttccgacc 669
Query: 481 tttgctattttttcatccctcacagtcctgaacttgactggagccatgcttgttggtgac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tttgctattttttcatccctcacagtcctgaacttgactggagccatgcttgttggtgac 729
Query: 541 ccttctgataaatctggaaaggttcaccttaatttcccagttctgagaacctataagaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ccttctgataaatctggaaaggttcaccttaatttcccagttctgagaacctataagaca 789
Query: 601 aaaagttgcacttggttgtcaagtgtgaagtgtgtcactttagaagtacctctgcttcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aaaagttgcacttggttgtcaagtgtgaagtgtgtcactttagaagtacctctgcttcaa 849
Query: 661 gtagtttctatacaggtctataggccttcagactcagttgatgattattcatatcctacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gtagtttctatacaggtctataggccttcagactcagttgatgattattcatatcctacc 909
Query: 721 ataaagtttcgtgcttcacgtcttaaagaattcagttatattggttctccattaccagac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 ataaagtttcgtgcttcacgtcttaaagaattcagttatattggttctccattaccagac 969
Query: 781 cccactgtgtttgatctatctgcagcaaatgttgcttctgctgatatttgttttggtttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 cccactgtgtttgatctatctgcagcaaatgttgcttctgctgatatttgttttggtttg 1029
Query: 841 tataaggaagaaaatttgcaagaagttatggctctttctgtcgagattctgaagaaattt 900
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1030 tataaggaagaaaatttgcaagaagttgtggctctttctgtcgagattctgaagaaattt 1089
Query: 901 caaaatgtggaatgtttgaagttccagaagtggaggaaggtgttgctagcaaaagattca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 caaaatgtggaatgtttgaagttccagaagtggaggaaggtgttgctagcaaaagattca 1149
Query: 961 ttgacaggtcttccttcattcaaaatgttaagtcgtttggagctaggagcagttgctagt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1150 ttgacaggtcttccttcattcaaaatgttaagtcgtttggagctaggagcagttgctagt 1209
Query: 1021 gaaattctgttggcattacttctaagaacgccatatctgaagactcttctt 1071
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1210 gaaattctgttggcattacttctaagaacgccatatctgaagactcttctt 1260
>gnl|LJGI|FS326727 weakly similar to UniRef100_P0C2G1 Cluster: F-box/LRR-repeat
protein At3g58980; n=1; Arabidopsis thaliana|Rep:
F-box/LRR-repeat protein At3g58980 - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 631
Score = 71.9 bits (36), Expect = 8e-12
Identities = 72/84 (85%)
Strand = Plus / Plus
Query: 34 aatgaggatcaggacatgataagtaacctccctgacgtcattattggtcgcattctttct 93
||||||| ||| ||||| ||||| ||||| |||||| |||||||||||| |||||||||
Sbjct: 241 aatgagggtcaagacattataagcaacctacctgacttcattattggtcatattctttct 300
Query: 94 cttcttcctaccaaagatgcagtc 117
||||| || | ||||||||||||
Sbjct: 301 tttctttctgctaaagatgcagtc 324