Miyakogusa Predicted Gene
- Lj0g3v0340149.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0340149.1 Non Chatacterized Hit- tr|J3LV29|J3LV29_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G1,39.29,0.0000000005,OS02G0605400 PROTEIN,NULL; EXTENDED
SYNAPTOTAGMIN-RELATED,NULL; C2,C2 membrane targeting protein;
C2,CUFF.23413.1
(456 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV406506 similar to UniRef100_Q69MT7 Cluster: C2 domain... 571 e-162
gnl|LJGI|FS326728 similar to UniRef100_Q69MT7 Cluster: C2 domain... 549 e-156
>gnl|LJGI|AV406506 similar to UniRef100_Q69MT7 Cluster: C2 domain-containing
protein-like; n=1; Oryza sativa Japonica Group|Rep: C2
domain-containing protein-like - Oryza sativa subsp.
japonica (Rice), partial (7%)
Length = 399
Score = 571 bits (288), Expect = e-162
Identities = 313/320 (97%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 1 atgtccgttaccatggatttcgccctt-ctcggtttcctcttcccttcgctctgggagat 59
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 80 atgtccgttaccatggatttcgcccgagctcggtttcctcttcccttcgctctgggggat 139
Query: 60 ccaagtcgccctcgccgccgctctcttcgccatcctcgcctaccgcttcttcaccttcag 119
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 ccaagtcgccggcgccgccgctctcttcgccatcctcgcctaccgcttcttcaccttcag 199
Query: 120 aaccgctgactcctccgccgatcgctcgctttccgaccattccgccgacgacgacaagat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aaccgctgactcctccgccgatcgctcgctttccgaccattccgccgacgacgacaagat 259
Query: 180 cggcttgaaaggagattctgccagttcggggtatttgatcaagttggaactattggctgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cggcttgaaaggagattctgccagttcggggtatttgatcaagttggaactattggctgc 319
Query: 240 gaagaatcttgttgctgctaacttaaatggcacgtcggacccttatgttatcatcacatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 gaagaatcttgttgctgctaacttaaatggcacgtcggacccttatgttatcaacacatg 379
Query: 300 tgggaatgaaaagcgattca 319
||||||||||||||||||||
Sbjct: 380 tgggaatgaaaagcgattca 399
>gnl|LJGI|FS326728 similar to UniRef100_Q69MT7 Cluster: C2 domain-containing
protein-like; n=1; Oryza sativa Japonica Group|Rep: C2
domain-containing protein-like - Oryza sativa subsp.
japonica (Rice), partial (7%)
Length = 553
Score = 549 bits (277), Expect = e-156
Identities = 320/339 (94%), Gaps = 19/339 (5%)
Strand = Plus / Plus
Query: 1 atgtccgttaccatggatttcgcccttctcggtttcctcttcccttcgctctgggagatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atgtccgttaccatggatttcgcccttctcggtttcctcttcccttcgctctgggagatc 163
Query: 61 caagtcgccctcgccgccgctctcttcgccatcctcgcctaccgcttcttcaccttcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 caagtcgccctcgccgccgctctcttcgccatcctcgcctaccgcttcttcaccttcaga 223
Query: 121 accgctgactcctccgccgatcgctcgctttccgaccattccgccgacgacgaca----- 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 accgctgactcctccgccgatcgctcgctttccgaccattccgccgacgacgacaagttc 283
Query: 176 --------------agatcggcttgaaaggagattctgccagttcggggtatttgatcaa 221
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tgcacttattttgtagatcggcttgaaaggagattctgccagttcggggtatttgatcaa 343
Query: 222 gttggaactattggctgcgaagaatcttgttgctgctaacttaaatggcacgtcggaccc 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gttggaactattggctgcgaagaatcttgttgctgctaacttaaatggcacgtcggaccc 403
Query: 282 ttatgttatcatcacatgtgggaatgaaaagcgattcag 320
|||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ttatgttatcatcacatgtgggaatgaaaagcgattcag 442